LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod08g1141	ATGGCAACAAGTCAAGATGTCTTCTCAGCTCTTGACAAGGCCAAGACACAAGGCTACCATTACAAGGCCATAGTGATTGCTGGGATGGGATTCTTCACTGATGCCTATGATCTTTTCTGCATCACTGCAGTTACCAAGCTTATCGGTCGCCTTTACTACTTCAACCCCCCCAGCCAAGAGCCAGGATCGCTTCCAAAGAATGTCAACAATGCCATAACTGGTGTTGCATTGTGTGGAACCCTTGCAGGGCAGCTCTTCTTTGGCTGGTTAGGTGATAAGCTTGGTAGGAAAAAAGCTTATGGGATAACTCTTGCAACCATGGTTTTTTGTGCCTTGGCATCAGGGCTTTCCTTTGGCTCCACATCCAAAAGTGTGGTTGCTACTCTATGCTTCTTCCGGTTCTGGCTTGGATTCGGCATTGGAGGAGACTACCCTCTCTCAGCTGTTATCATGTCTGAATATGCCAATAAGAAAACTCGAGGCGGGTTCATTGCAGCCGTGTTTGCAATGCAAGGAGTTGGAATACTGGTTGCTGGAGGTGTTGCCATGTTTGTCTCCCATCTGTTCTTATCAGCTTACCAAGCTGTCGATTTCGAAACTGATCCTGCAGCATCTACTCAGCCAGAAGGAGACCTTGTTTGGAGAATCGTGCTCATGTTCGGCGCGTTTCCTGCTGCACTCACTTATTACTGGAGAATGAAAATGCCTGAAACTGCTAGATACACTGCCTTAGTGGAAGGAGATCACAGGAAGGCTGTTGAAGATATGGCCAAAGTTCTAGACAAGGGCATGCCTATAGAAGAATCAAATTCTTCCAGGTCTGATGCCACAGCTAGCCCCACTTATGGGCTCTTCTCATCACAGTTTCTTGATAAGCATGGCCTTCACCTTCTTGGGACAACCAGCACCTGGTTCTTGTTGGATATTGCCTTCTACACTCTTCAGCTCACACAAAAAGATATCTACCCAGCCATTGGACTAGTAGACCAGGCTTACAAAATGAATGCCATAGAGGAGGTTTATCAGCTCTCCAAAGCAATGTTTATAGTAGCCCTGCTTGCCACAGTCCCCGGGTACTGGTGCACAGTATTCCTCATTGATAAGATTGGAAGGTTCAGGATCCAACTTCTTGGATTCCTTGTAATGTCTCTTTCTATGTGGTTTCTGGGGCAAAATTATGAAGAATATAGGGGACAGTCTAACTGTGACTCGAATGCAACAAAAGATTGTAATGGCAACCCTCCCATGTTTGCCATGCTTTTTGGGGTTACCTTATTCTTTGCTAACTTTGGACCAAATAGCACAACATTTATAGTTCCAGCAGAGCTTTTCCCTGCTAGGTTTCGTTCAACGTGCCACGGATTATCAGCAGCAGCAGGAAAATTAGGAGCTATCATTGGTGCTTTTTTGGTCCAAAGCCATATAGATAATGCAGATAGCAAAGTGAAAGAAATGAAGAAGGCACTTATGGCACTTTCCGCTGTCAACCTGATTGGATTCTTTTGCACTTTCCTGGTACCAGAAACACAAGGCCGATCACTAGAAGAAATCTCTGGAGAAGATAAAGAACTTCAGAGTGTTATCACTGTAGATGATCCAAATAAGAAAACAGACAATTCAAATGAGAAAGAAGATGATGCGAAAGAGGCAAAAAGAAATGCCAGTGTTAATGATTCTCCAGGAACAATAACAGTTTAG	1698	0.4446	MATSQDVFSALDKAKTQGYHYKAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYFNPPSQEPGSLPKNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKAYGITLATMVFCALASGLSFGSTSKSVVATLCFFRFWLGFGIGGDYPLSAVIMSEYANKKTRGGFIAAVFAMQGVGILVAGGVAMFVSHLFLSAYQAVDFETDPAASTQPEGDLVWRIVLMFGAFPAALTYYWRMKMPETARYTALVEGDHRKAVEDMAKVLDKGMPIEESNSSRSDATASPTYGLFSSQFLDKHGLHLLGTTSTWFLLDIAFYTLQLTQKDIYPAIGLVDQAYKMNAIEEVYQLSKAMFIVALLATVPGYWCTVFLIDKIGRFRIQLLGFLVMSLSMWFLGQNYEEYRGQSNCDSNATKDCNGNPPMFAMLFGVTLFFANFGPNSTTFIVPAELFPARFRSTCHGLSAAAGKLGAIIGAFLVQSHIDNADSKVKEMKKALMALSAVNLIGFFCTFLVPETQGRSLEEISGEDKELQSVITVDDPNKKTDNSNEKEDDAKEAKRNASVNDSPGTITV*	566

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dod08g1141	565	TIGRFAM	2A0109: phosphate:H+ symporter	10	520	IPR004738	GO:0005315\|GO:0006817\|GO:0016021
Dod08g1141	565	MobiDBLite	consensus disorder prediction	525	565	-	-
Dod08g1141	565	PANTHER	PHOSPHATE TRANSPORTER	6	530	-	-
Dod08g1141	565	MobiDBLite	consensus disorder prediction	525	553	-	-
Dod08g1141	565	CDD	MFS_PhT	24	509	-	-
Dod08g1141	565	Coils	Coil	475	495	-	-
Dod08g1141	565	Gene3D	MFS general substrate transporter like domains	267	532	IPR036259	-
Dod08g1141	565	Gene3D	MFS general substrate transporter like domains	19	263	IPR036259	-
Dod08g1141	565	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	511	IPR020846	GO:0022857
Dod08g1141	565	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	6	530	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod08g1141	Dod-Chr8	14556114	14558657	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod08g1141	5	523	Inorganic Solute Cotransporters	AT2G32830	59.280	0.0	625

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod08g1141	K08176		-	gmx:100820250	856.284

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod08g1141	08	14556114	14558657	Dod08g1141	08	14556114	14558657	ECH

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