Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1140 ATGAAGTTCCAGCTCTCTATTGTTCCCTTTGTTCCGTTATGCTTCACGTTGTCTCTCTTAGGCTTGATTGTGGCTGACCTGAGCTCTGACAGAGAAGCACTCCTTGAGTTTTCTTCTAGTGTCCCACACCACCCAAGGTTAAACTGGAATGACACTGCTCCAATCTGCACTTCATGGATTGGTGTGATTTGCAACTTGAATGGAACTCGTGTCGTCGGCATCCAACTTCCGGGGATTGGACTCAAGGGCTCCATTCCAGAGAAAACCATAGGAAAACTAGATGCTCTTACAACCCTAAGCCTTCATTCCAATGGCCTTAGAGGGAATCTTCCTTCTGATATCCTCTCCATTCCATCACTGCAATATGTGCACCTGGAGCACAATAACTTCTCAGGCATAATCCCTTCATCTGTCTCCCCAAAACTCATTGCATTGGATGTTTCCTTTAACAACTTCTCTGGCAGCATCCCCCCTACATTTCAGAATCTAAGACGGCTCACGTGGTTGTATCTTCAAAACAATTCAATCTCTGGAGCTATCCCTGCGTTCAACCTTCCGAGGCTCAAATATTTGAATTTGAGCTATAATAACTTGAATGGCTCAATTCCAAACACCATCAACCAATTTCCATATAGTTCTTTTGTTGGAAATTCTCTCTTATGTGGGCCACCTCTCAATCAGTGTTCCTTAATCTCTCATTCTCCATCTCCTTCTCCTGTTTACCAACCACTTGCTCCAGAAGCTAGGCAAAATCAAAAGGCTACCACTTCTAAGAAATGCTTTGGCATAGCTTCTATACTTGCTCTAGCAATTGGGGGATGTGCCTTCCTTTCTCTCCTAGTTTTAGTGATCTCTATATGCTGCTTGAAGAGGAAGAACAGTAAAAGCAATGGAGTACTTAAAGGAAAGGCATCTTGTGCTGGAAAGACTGAGGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAGAGGCTGAAAAGAACAAGTTGTTCTTCTTTGAAGGTTTCTCTAATAGCTTTGACCTTGAAGATTTGTTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGTAGCTATGGAACAACATACAAGGCTACTTTGGAGGAGGGGACAACAGTGGTAGTTAAGAGGTTGAGGGAAGTCGCGGTCGGAAAGAAGGAGTTTGAGCAGCAGATGGAGGTTGTGGGAAGAAGCGCGCGGCATCCCAATGTCATGCCACTTCGAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTACAGCTTCATGCCAGGAGGCAGCTTGTTTGCCTTGCTGCATGGAAACAGGGGTGAAGGGAATAATAACTCATTAAACTGGGATTCAAGAATGAAGATTGCACTTGGAGTTGCAAAGGGAATCGCCTTCATTCACTCTGAGGGTGGTCCAAAGTTCACTCATGGCAACATAAAGTCAACCAATGTGCTCATAACCCAAGAACTTGATGGCTGCATCACTGATGTTGGACTAACTCCTCTGATGAACACCCCACCAACAATATCAAGAGCAAACGGCTACCGTGCTCCGGAAGTCACTGAGATCAGGAAGATCACACAGAAGTCTGATGTCTACAGCTTTGGGGTGATCCTCCTTGAGATGCTCACAGGCAAGACACCACTAGGGTATGCTGGATACGAAGACATGGTTGATCTTCCAAGGTGGGTGAGGTCTGTGGTGCGCGAGGAATGGACGGCTGAAGTTTTCGATGAGGAGCTGCTTAGAGGGCAATATGTTGAAGAGGAGATGGTGCAGATGCTTCAGGTTGCATTGGCCTGTGTGGCAAAGGTGGCAGATAATAGGCCAAGAATGGATGAAGCTGTTAGAACCATAGAGGAAATTAGGCAGCCTGAGTTGAAGAACCGTACTTCATCTGAGTCTGAATCTAATGTGCAAACACCATGA 1914 0.4519 MKFQLSIVPFVPLCFTLSLLGLIVADLSSDREALLEFSSSVPHHPRLNWNDTAPICTSWIGVICNLNGTRVVGIQLPGIGLKGSIPEKTIGKLDALTTLSLHSNGLRGNLPSDILSIPSLQYVHLEHNNFSGIIPSSVSPKLIALDVSFNNFSGSIPPTFQNLRRLTWLYLQNNSISGAIPAFNLPRLKYLNLSYNNLNGSIPNTINQFPYSSFVGNSLLCGPPLNQCSLISHSPSPSPVYQPLAPEARQNQKATTSKKCFGIASILALAIGGCAFLSLLVLVISICCLKRKNSKSNGVLKGKASCAGKTEVSKSFGSGVQEAEKNKLFFFEGFSNSFDLEDLLKASAEVLGKGSYGTTYKATLEEGTTVVVKRLREVAVGKKEFEQQMEVVGRSARHPNVMPLRAYYYSKDEKLLVYSFMPGGSLFALLHGNRGEGNNNSLNWDSRMKIALGVAKGIAFIHSEGGPKFTHGNIKSTNVLITQELDGCITDVGLTPLMNTPPTISRANGYRAPEVTEIRKITQKSDVYSFGVILLEMLTGKTPLGYAGYEDMVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQVALACVAKVADNRPRMDEAVRTIEEIRQPELKNRTSSESESNVQTP* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1140 637 ProSiteProfiles Protein kinase domain profile. 345 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1140 637 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515
Dod08g1140 637 SUPERFAMILY Protein kinase-like (PK-like) 349 614 IPR011009 -
Dod08g1140 637 Gene3D Ribonuclease Inhibitor 141 229 IPR032675 -
Dod08g1140 637 PANTHER RECEPTOR-LIKE KINASE 4 636 - -
Dod08g1140 637 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Dod08g1140 637 Gene3D Phosphorylase Kinase; domain 1 310 420 - -
Dod08g1140 637 SUPERFAMILY L domain-like 39 225 - -
Dod08g1140 637 PANTHER OS05G0588300 PROTEIN 4 636 - -
Dod08g1140 637 MobiDBLite consensus disorder prediction 618 637 - -
Dod08g1140 637 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Dod08g1140 637 Pfam Protein kinase domain 349 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1140 637 ProSitePatterns Protein kinases ATP-binding region signature. 351 382 IPR017441 GO:0005524
Dod08g1140 637 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Dod08g1140 637 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1140 Dod-Chr8 14548248 14552565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1140 13 635 Receptor kinase-like Gene Family AT5G58300 58.228 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod08g1140 Pkinase 7.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1140 - - aprc:113868460 1004.2