Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1115 ATGAAGACTTTCGGAGAACGGTTCAAGTCGTCACAGGCTCTTCTGAGCATGCTACTGGTGCAAGTTTTTACAACTGGGATGCAGTTGCTATCAAGGGTCATATTGGTTCATGGCACCTTCATTTTTGCACTCACTGCTTATCGCCATATTGTTGCTGCTTTCTGTGTTGCCCCCTTTGCTTTATACTATGAGAGGGGCCGCACAAAGAAGTTCAGTTTGAAAGTTTGGCTTTGGATCTTCATTAACGCCTTAGTCGGGATGACCATGGCACAGGGACTGTTCTATTATGGCCTAAGAGACACTTCAGCTACTTATTCTGTCAACTTTCTGAACCTGGTTCCAATATGCACCTTCGTTGTCTCCATAATATGCAGGATGGAGAAACTGGGGGTGCAAACATGGGCCGGTAAAGCCAAGTGTGTGGGGGCAATTTTGTGTGTCGGAGGAGCATTGGCCACCAGCCTTTACAAAGGGAAGGAATTCTATATTGGGCATCATCATGCTAAGGCCTCTGCTGTTGTGACACAAAAGACCAACATGCTTCGTGGCACTTTCTTTTTGATTTGCAGCTGCTTCTCCTTCACAGCTTGGTTCATTGTGCAAGTCAAGTTGCTTAAAGCATTTCCATTTAGGCTTTGTGGAACGATGCTAGCATGCGTAACGGCAGCACTCCAATCTGCAGTCATAGGTGTATGTATAGATTCCAGTAAAGCTGCTTGGAAATTACAGTGGAATCTACAACTTATCACTATAGTGTACTCGGGAGCACTTGCCACTGGTGCTGTATTTTCCTTGCTATCATGGGTTATTTCGATCAAAGGACCTACTTACCCCCCAATGTTCAATCCCCTGGTTCTTGTTTTAGTGGCCTTATCAGAAGCTTTCATACTTGGTGAACCATTAAGTATTGGAACGATTTTGGGTACAGTTTTGATCATAACAGGATTGTACTCCTTTCTGTGGGGCAAAAAGAAGGAGACAAGGGGCTTGCTGCCTCAACCAAACTTACCAGCTGGAGAAGTGTCAACAAACATTATTGCTGAGCCTACTGGGGCGCAAGCAACAGCAGTAGTTGTACCAAGTTCTTCAGCTAATAATAGTGTACTCCTAGTGATAGAAAGTAAGACTGGCACCAACTGA 1140 0.4474 MKTFGERFKSSQALLSMLLVQVFTTGMQLLSRVILVHGTFIFALTAYRHIVAAFCVAPFALYYERGRTKKFSLKVWLWIFINALVGMTMAQGLFYYGLRDTSATYSVNFLNLVPICTFVVSIICRMEKLGVQTWAGKAKCVGAILCVGGALATSLYKGKEFYIGHHHAKASAVVTQKTNMLRGTFFLICSCFSFTAWFIVQVKLLKAFPFRLCGTMLACVTAALQSAVIGVCIDSSKAAWKLQWNLQLITIVYSGALATGAVFSLLSWVISIKGPTYPPMFNPLVLVLVALSEAFILGEPLSIGTILGTVLIITGLYSFLWGKKKETRGLLPQPNLPAGEVSTNIIAEPTGAQATAVVVPSSSANNSVLLVIESKTGTN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1115 379 PANTHER WAT1-RELATED PROTEIN 11 329 - -
Dod08g1115 379 PANTHER WAT1-RELATED PROTEIN 11 329 IPR030184 GO:0016021|GO:0022857
Dod08g1115 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 325 - -
Dod08g1115 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 147 - -
Dod08g1115 379 Pfam EamA-like transporter family 14 146 IPR000620 GO:0016020|GO:0016021
Dod08g1115 379 Pfam EamA-like transporter family 182 319 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1115 Dod-Chr8 14233515 14240626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1115 15 324 Nodulin-like Gene Family AT1G09380 33.962 7.93e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1115 - - gmx:100792281 517.309