Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1112 ATGGATGTAATGAACTTTTCTGGTGGAATTACAAAACCTGGTTATTTGTTTGCTCAAACAGAAATGCCTATTCTAGCATTTGGTCATTCTACATTGGCTCTTCGGTTGCCATGCAACTGTGTGAGGAGGATGGGGTTGGTTACAAAGCTTAAATATTCTGTTGCTGATAGGACATTGGCTTCTAGTTTTGTGGATTCACCGGCATCCAAACCAGAGTCCGGCCCAGTGAGTAGGAGGCGGGGAGGAGGCTCATCGTTATATATTCGTCCTAGTTTATCAATAATGAAGAAGGATAGGGTGGAGATGCGTGAAAAGGTTTATGAATTCTTGCGGGGAATTGGCATTGTCCCTAACGAGCTTGATGGTCTTGAACTTCCTGTGACAGTTGAGGTTATGAGGGAACGCATAGATTTTCTTCACAGTGTGGGGCTTACAATCGAAGACATTAACAACTATCCACTTGTTCTTGGCTGCAGCGTCAAGAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAAGAAATCCACATTCACTCAGTTTTTGCGGAGATACCCACAAGTGCTCCATGCTAGTGTTGTTGTCGATCTTGTACCGGTGGTCAAGTATCTTCAGGGGATGGATATAAAGCCCAACGATATTCCTCGTGTTCTTGAGAGGTACCCTGAAGTGTTAGGATTTAAACTTGAGGGAACCATGAGCACGTCAGTTGCTTATTTGGTTGGAATTGGTGTATCAAGAAGAGAAATTGGAGGTGTCTTAACTAGATACCCTGAGATTTTGGGGATGCGAGTTGGTCGAGTCATCAAGCCTTTTGTGGAATTTCTGGAAAGCTTGGGAATTCCAAGGTTAGCTATTGCTAGATTGATAGAGAAAAAACCTTATATTCTTGGATTTGGGCTTGATGAGAAGGTGAAGCCAAATGTGAAATCCCTTGAAGAGTTTAATGTAAGGCGAACATCACTTCCCTCTGTAATTGCTCAGTATCCTGATATCATTGGAACTGACTTAAAGCAAAAGCTTGTCAATCAGAGAAGCTTACTCAACTCTGTACTTGATGTGGATCCTGAGGATTTTGGCAGAGTTGTTGAGAAGATGCCGCAGGTAGTTAGCCTCAGTAGAGAACCTATGCTGAAGCATGTTGATTTTCTTAAGGATTGTGGATTTTCCTTGGAGCAGATGAGGAAGATGATTATTGGATGCCCTCAACTACTTGCTTTGAACATTGACATCATGAAACTTAGCTTTGATTACTTCCAAATGGGGATGAAGAGGCCTTTGGAAGACTTGGTTATTTTCCCAGCATTCTTCACATATGGTCTGGAGTCAACTGTAAAACCTAGGCATAAGGTGGTTGCTAAGAAAGGATTAAAGTGTTCTCTTGCGTGGATGCTTAATTGCTCTGATGAGAAGTTTGACCAACGAATGGAGTATGACACTATAGACATGGAAGAGATGGAAATGGAACCATCATTCGACATGAATTCACTTATGCAACCAAGGAATGATGAATCAGGTTCTGATTATGAAGACAGTGGTGATGATGATGATTAG 1563 0.4184 MDVMNFSGGITKPGYLFAQTEMPILAFGHSTLALRLPCNCVRRMGLVTKLKYSVADRTLASSFVDSPASKPESGPVSRRRGGGSSLYIRPSLSIMKKDRVEMREKVYEFLRGIGIVPNELDGLELPVTVEVMRERIDFLHSVGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVKKSTFTQFLRRYPQVLHASVVVDLVPVVKYLQGMDIKPNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREIGGVLTRYPEILGMRVGRVIKPFVEFLESLGIPRLAIARLIEKKPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLVNQRSLLNSVLDVDPEDFGRVVEKMPQVVSLSREPMLKHVDFLKDCGFSLEQMRKMIIGCPQLLALNIDIMKLSFDYFQMGMKRPLEDLVIFPAFFTYGLESTVKPRHKVVAKKGLKCSLAWMLNCSDEKFDQRMEYDTIDMEEMEMEPSFDMNSLMQPRNDESGSDYEDSGDDDD* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1112 520 Gene3D Transcription termination factor 3, mitochondrial 128 272 IPR038538 -
Dod08g1112 520 Gene3D Transcription termination factor 3, mitochondrial 273 484 IPR038538 -
Dod08g1112 520 PANTHER CGI-12 PROTEIN-RELATED 46 509 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 46 509 - -
Dod08g1112 520 MobiDBLite consensus disorder prediction 492 520 - -
Dod08g1112 520 Pfam mTERF 168 475 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 430 461 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 363 393 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 218 249 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 398 429 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 290 321 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 83 116 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 182 213 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 326 358 IPR003690 GO:0003690|GO:0006355
Dod08g1112 520 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1112 Dod-Chr8 14213283 14214845 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod08g1112 mTERF 2e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1112 K15032 - gmx:100785223 822.387