Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1111 ATGGGTGCGGTTGAGTTTTTCCAGCAGCAGCCTGTGGTGATTGACGCCGTGCCGGTTCTGTCACTGAACTCGCTGCCGTTGGGGTTCCGTTTCCGTCCGACGGACGAGGAGCTGATCGACTTCTACCTGCGGCAGAAGATCAACGGGAAAGGCGATGACGTTTGGGTCATTCGCGAGATCGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTGCGGAACAAGGATCCAGAGTGGTTTTTCTTCTGTCCACAGGACCGGAAGTATCCGAACGGGCACCGGCTGAACCGAGCAACGACTCATGGGTATTGGAAGGCAACCGGCAAGGATAGGAAGATTAAGTCTGGCTCCACCTTGATTGGAATGAAGAAGACTCTCGTTTTCTACACTGGCCGTGCTCCAAAAGGGAACAGGACCAATTGGGTTATGCATGAGTACAAGCCTACACTCAAGGAGCTAGATGGTACCAATCCAGGACAGAGTCCGTATGTCCTTTGTCGATTATTTAAGAAACAAGATGAGAGTCTTGAAAGTCCAAACGGCGGTGAAGTGGAGCGGACTACTTCAACTCCTACAACTGCCAATTACTCCCCAGAAGAAATACAATCTGATCCAACTCTAAACCCAGTATCTTCCTCACCGGCTACAGAAGATGATAGGCAACTAGCAGTTGTCCCTGAGAACTCTGAGGAAGCAATATCTAACATTATAACCCCACTTGACTGCCGTAGCGATGGATATGATGAACAAAATCAAAGTGTAGCAGTAGAACCATCGATGGAGGATGCTCAGCTACTGAACATGGACATATTTGATGACCCAACTGAGCAATTTGGTGACAAATTCTTCTCCCCAATCAACATGCATATTCTGACAGAATTTAATTATCAATCAAACAATGAATCAAATGGTCAATGTGGGGTGCAATATCAATATGGTACAAATGAGACCGATATGTCAGAATTTTTTGACTCAGTTGTTAATTGGGATGATATCCCGTATGAGGAGCCCAGCAGCCAAACACCAAACTCTGCCTGGTTTGATGTTAAGGGCAATGGATCATGGAGCAACTCAACTGTAGAAATGACCGACACAATGCATCTGCAAGCATTTGATGCTTCTTATACTGGAGAGCCAATTGACACAAAGATTCCTTTGGTGACACCTAAAGAATTCAATGCCATGACCTCTAACCTTAGTGGCAATGAGCTCCAAAGCAATATAGGAGTGTTTGAAAACCATTCCCATATGCCTTTCTCAACTGATGTTAGTATGAGCCATGTGTACAATGCGGCCAGTGATTATGAGCAACAAAGAAATTTCAATATGAGTGGTGAGACTGGAATCAGGATAAGGCCTCGACGAGGTCGGCATGAAGAGCCAATGATGAACCCTGTGATGCAGTCACAGGGTACCGCACCTAGGAGAATACGATTGCAGCGATTTGTTGTGCATTCACATAGTTCTGATGAGGCCGCAATAGAGGAGAGTTGTGCATCAGAATACCATAATTCAAAACCAGCCACTGCTGGGGAGACGAAAGCTTCCGGAGACCATGCTGCTGGTGAGAGTGACTCTGTTACTAATGATGTGGATGAACTGGAGGAGACATCGCCCGGGTTAGGTGAGATAATATTGAACCGTAAACAAGAGGCTTCCCGCAAGACATCTTCTGTTTTAGCAGCTTCCGATGAGGTGTCGAGTTGTGCATCAGAAGATGATGCGTCAGAAGACCATTATAAAAAGCCAACCGCTGCTGGGGAGAGGAAAGCTTCTGAAGACCATGCTTCTGGTGAGAGTGCCACTGTTAGTGATGATGCGGATGAACTGGATGCGATGTCATGCAAGTTAGCTGCTGAGAAAAATGAGTCGTAA 1887 0.4642 MGAVEFFQQQPVVIDAVPVLSLNSLPLGFRFRPTDEELIDFYLRQKINGKGDDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGNRTNWVMHEYKPTLKELDGTNPGQSPYVLCRLFKKQDESLESPNGGEVERTTSTPTTANYSPEEIQSDPTLNPVSSSPATEDDRQLAVVPENSEEAISNIITPLDCRSDGYDEQNQSVAVEPSMEDAQLLNMDIFDDPTEQFGDKFFSPINMHILTEFNYQSNNESNGQCGVQYQYGTNETDMSEFFDSVVNWDDIPYEEPSSQTPNSAWFDVKGNGSWSNSTVEMTDTMHLQAFDASYTGEPIDTKIPLVTPKEFNAMTSNLSGNELQSNIGVFENHSHMPFSTDVSMSHVYNAASDYEQQRNFNMSGETGIRIRPRRGRHEEPMMNPVMQSQGTAPRRIRLQRFVVHSHSSDEAAIEESCASEYHNSKPATAGETKASGDHAAGESDSVTNDVDELEETSPGLGEIILNRKQEASRKTSSVLAASDEVSSCASEDDASEDHYKKPTAAGERKASEDHASGESATVSDDADELDAMSCKLAAEKNES* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1111 628 SUPERFAMILY NAC domain 20 175 IPR036093 GO:0003677|GO:0006355
Dod08g1111 628 MobiDBLite consensus disorder prediction 185 222 - -
Dod08g1111 628 MobiDBLite consensus disorder prediction 613 628 - -
Dod08g1111 628 Pfam No apical meristem (NAM) protein 26 151 IPR003441 GO:0003677|GO:0006355
Dod08g1111 628 MobiDBLite consensus disorder prediction 576 606 - -
Dod08g1111 628 MobiDBLite consensus disorder prediction 178 231 - -
Dod08g1111 628 ProSiteProfiles NAC domain profile. 25 175 IPR003441 GO:0003677|GO:0006355
Dod08g1111 628 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 20 465 - -
Dod08g1111 628 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 20 465 - -
Dod08g1111 628 MobiDBLite consensus disorder prediction 508 628 - -
Dod08g1111 628 MobiDBLite consensus disorder prediction 555 569 - -
Dod08g1111 628 Gene3D NAC domain 34 179 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1111 Dod-Chr8 14189073 14195056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1111 19 339 NAC Transcription Factor Family AT5G24590 49.123 1.58e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod08g1111 NAM 2.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1111 - - aip:107609038 768.844