Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1097 ATGGGCCTCTCAAGTCTCCCATCACCATCTGAAGGAGTACTATGTGCAATCTTTGTTAACACTGTGTTGTCAATTTCCATATTCAAAGGCATTGTTAGGACAATTCTACACATTGTTGGCATCCCGCTCTCATCATCCTCCACTTCACCAACCCCATCACCAAATGCCTCCCAACACTCGCCACCCGAGTCCTTCGATTTCCTTCTTAGTAGCCCCAGCAGCCCCACTGAGTGTCTAATTGAAGAGTTTAGAAGCCGGATGCCGGCGCTCCGGTTCGATAGTGTGTGTTCCTGTGAAGAACTTGAGCATGATTGCTGTGTTTGCCTCACTGAGTTTGAGCCTGAATCAGAGGTGAACCACTTGTCTTGTGGCCATCTCTTCCACAGAGTATGCTTGGAGAAGTGGCTAGACTACTGGAATCTCACATGTCCACTTTGCAGGACTTCCTTGATGCCCGAAGAGGATGATCCATGGTCAATAGTAACCAATGAACCTTGGTCTCTAGTAACCAATGAGTGA 519 0.4778 MGLSSLPSPSEGVLCAIFVNTVLSISIFKGIVRTILHIVGIPLSSSSTSPTPSPNASQHSPPESFDFLLSSPSSPTECLIEEFRSRMPALRFDSVCSCEELEHDCCVCLTEFEPESEVNHLSCGHLFHRVCLEKWLDYWNLTCPLCRTSLMPEEDDPWSIVTNEPWSLVTNE* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1097 172 Pfam Ring finger domain 104 147 IPR001841 -
Dod08g1097 172 SMART ring_2 105 146 IPR001841 -
Dod08g1097 172 PANTHER - 1 155 IPR044249 -
Dod08g1097 172 SUPERFAMILY RING/U-box 96 153 - -
Dod08g1097 172 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 155 - -
Dod08g1097 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 153 IPR013083 -
Dod08g1097 172 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1097 Dod-Chr8 13914114 13916243 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1097 1 156 C3H Transcription Factor Family AT2G04240 56.962 1.95e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1097 K16285 - gmx:100786803 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1097 08 13914114 13916243 Dod08g1097 08 13914114 13916243 ECH