Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1090 ATGAAGAAATCACCTTCAGGCCATACTTTCCATCAGTCCAGCAAAAGAAGACAGAATGCTAACAATATTCTCCAAGACAGTGGTGCAGGGAATGACACAAAGAAGCACAACAATCCTAAGGCTCCTTTCATGAAATCTTTCAAGTCTGCTGTCAAGAAATATACAGCAGTTTTTACATTGGTTCTCTTGGGAAAAAGCAAAAGTAAAAGAGCCTCAAATGTTCTTGAACTTGATGACAGAAAGAATACCTCAAAAGTCAGAGGGGCATCATCTTCAATTGACTCATCATCCAAGAGTTCATCAAAGTGGAAGTTTTCTTATTCCTATGCATCATCTAGCACTGCAAGTGGACAGCTTGGACTTGGCAACTTCACCTTTGAAGAAATTTACAAGTCAACATCAAAATTCTCTCCAGATAATCAGATAGGGGAAGGTGGTTTTGGAACAGTCTATAAAGGAAAGCTTAGTGATGGATCTCTAGTGGCTGTGAAGCGTGCCAAGAAGGATGCAAACAGAAACTTGTATGAGTTCAAGAATGAAATATTCACCTTGTCAAAAATTGAGCATCTGAATCTTGTGAGGTTATATGGATATTTGGAGCATGGAGATGAGAGGATTATTGTTGTTGAATACGTTGGTAATGGGACACTTCGGGAACATCTAGATGTTACTCGGGGAGATGGACTAGAAATTGGTGAGCGTTTAGACATAGCTATTGATGTAGCTCATGCAATCACTTACCTCCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATCTTGATCACCGAGAATTTAAGGGCTAAAGTTGCAGACTTTGGTTTTGCACGGTTATCTGATGACCCTAATGCAACCCATATTTCAACTCAAGTTAAAGGAACAGCTGGCTACATGGATCCTGAGTACCTTCGAACGTATCAACTAACTGAGAAGAGTGACGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGATGACAGGAAGACATCCAATAGAGTCAAAGAGACCCCTTGAAGAGAGAGTGACAATCAGATGGGCAATGAAGATGCTGAAACAAGGGGATGCTGTGTTTGCCATGGACCCAAGAATGCGAAGAAGTCCATCCTCTAACAAGGCAGTGAAGAAGGTTCTCAAGCTAGCTTCCCAATGCCTTGGATCTTCGAAACAATCGCGGCCATCCATGAAGAGTTGTGCAGAGGTTTTATGGGGCATCCGTAAGAACTTCAGAGATGAAGCGACTTATAATCCTCCCCTTCCTTCTCACCACTCTGCAAATTTTCTTCAAAGAGAAAAGAATATGCATACGTTACTTGGTATTGAAGATGACGACAGCTATAAATTTGTATCTGCACCTAACAAAATTCATTCATAA 1389 0.4039 MKKSPSGHTFHQSSKRRQNANNILQDSGAGNDTKKHNNPKAPFMKSFKSAVKKYTAVFTLVLLGKSKSKRASNVLELDDRKNTSKVRGASSSIDSSSKSSSKWKFSYSYASSSTASGQLGLGNFTFEEIYKSTSKFSPDNQIGEGGFGTVYKGKLSDGSLVAVKRAKKDANRNLYEFKNEIFTLSKIEHLNLVRLYGYLEHGDERIIVVEYVGNGTLREHLDVTRGDGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLRAKVADFGFARLSDDPNATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIESKRPLEERVTIRWAMKMLKQGDAVFAMDPRMRRSPSSNKAVKKVLKLASQCLGSSKQSRPSMKSCAEVLWGIRKNFRDEATYNPPLPSHHSANFLQREKNMHTLLGIEDDDSYKFVSAPNKIHS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1090 462 MobiDBLite consensus disorder prediction 11 34 - -
Dod08g1090 462 Pfam Protein tyrosine and serine/threonine kinase 139 407 IPR001245 GO:0004672|GO:0006468
Dod08g1090 462 Gene3D Transferase(Phosphotransferase) domain 1 212 422 - -
Dod08g1090 462 MobiDBLite consensus disorder prediction 1 42 - -
Dod08g1090 462 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 31 438 - -
Dod08g1090 462 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Dod08g1090 462 CDD STKc_IRAK 142 407 - -
Dod08g1090 462 MobiDBLite consensus disorder prediction 81 100 - -
Dod08g1090 462 PANTHER RECEPTOR-LIKE PROTEIN 55 31 438 - -
Dod08g1090 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Dod08g1090 462 Gene3D Phosphorylase Kinase; domain 1 95 211 - -
Dod08g1090 462 ProSiteProfiles Protein kinase domain profile. 136 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1090 462 SMART serkin_6 136 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1090 462 SUPERFAMILY Protein kinase-like (PK-like) 117 410 IPR011009 -
Dod08g1090 462 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1090 Dod-Chr8 13852501 13856460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1090 108 400 Receptor kinase-like Gene Family AT1G79620 43.333 1.06e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Dod08g1090 PK_Tyr_Ser-Thr 5.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1090 - - lja:Lj2g3v2222900.1 659.448