Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1072 ATGGAAACCCTCCCACTCCTCCTCGCTCTAGCAGCTGCGATATCAGCCTATTTCCTATGGTTCCAACTCCTCTCCAAGACCCTTACTGGCCCTAAGGCCTGGCCCTTCGTTGGAAGCCTTCCGGCCCTCTTCAAGAACCGCAACCGCGTCCACGACTGGATCGCCGACAACCTTCGTGCTGCCGGCGAATCCGCCACCTACCAAACTTCCATCATCCCCTTCCCCTTCTTGGCACGCAAGCAAGGATTCTACACCGTCACGTGCCACCCCAAGAACCTCGAGCACATCCTCCGAACGCGCTTTGATAACTACCCAAAAGGCCCAAAATGGCAAACCGCATTCCACGACCTATTAGGCCAAGGAATCTTCAACAGCGATGGCGACACGTGGCTCATGCAACGCAAAACAGCTGCCTTAGAGTTCACCACACGAACCCTAAGGCAAGCCATGGCGCGCTGGGTGAACCGCACCATAAAAAGCCGTTTATGGTGCATTCTAGACAAAGCAGTGCAGGAGAACGTCTCGGTCGATCTGCAAGACCTTCTCCTGCGCTTAACATTCGACAACATATGCGGTCTCACTTTCGGGAAAGACCCCGAAACTCTCTCACCGAATCTACCAGAAAACCCTTTCGCCGTGGCATTTGACTCTGCCACGGAAGCCACAATGCATAGATTCCTATACCCCGGTCTGTTCTGGAGGTTCCAGAAGCTTCTATGCATTGGACAAGAAAAACGGTTAAAGAAGAGCCTCGACGTAGTTGAGGCTTACATGAACGACGCCGTTTTGGACCGCAAGGAAACCCCCTCGGACGACTTGCTTTCCCGCTTCATGAAAAAGCGCGACGCTAACGGAAAACCGTTAAACTCAAATGTTTTGCAACGGATTGTCCTGAACTTCGTTTTGGCGGGAAGGGACACGTCATCGGTGGCGCTGAGCTGGTTCTTCTGGCTGGTGATGAACCACCCCGAAGTTGAGAAGAGGATCGTGGCGGAGATAGCAGCGGTTCTCTGCCAGAGCCGCGGCAGCGACCGCCGGCGGTGGGTGGAGGAGCCTCTGGACTTCGAGGAAGCCGATAAAATGATTTACCTGAAAGCTGCTTTGGCCGGAAACACTGCGTTTGTACCCTTCAGTGCCGCAGGACTTCAAGCAGGCCGTCGCCGACGACGTGTTGCCGGACGGCACGGTGGTTCCGGCGGACCGGACCGGTGGCTTTCGGTTCGGGGTGACCGGTTCGAACTGCCAAAAGATGGGTTCAAGTTTGTGGCATTTAATGCTGGACCGAGGACCTGTTTGGGGAAGGACTTGGCTTACCTGCAGATGAAATCTGTGGCTGCGGCTGTTCTGGTGAGGTACCGGCTGTCGCCGGTTCCCGGTCACAGGGTGGAGCAGAAGATGTCGCTCACTTTGTTCATGAAGAACGGTCTCAGGGTGTTCTTGCATCCGAGGAAGATTGAAGATGCGGCAGTTGGGGTTGGTGCCACGTAA 1488 0.5511 METLPLLLALAAAISAYFLWFQLLSKTLTGPKAWPFVGSLPALFKNRNRVHDWIADNLRAAGESATYQTSIIPFPFLARKQGFYTVTCHPKNLEHILRTRFDNYPKGPKWQTAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNRTIKSRLWCILDKAVQENVSVDLQDLLLRLTFDNICGLTFGKDPETLSPNLPENPFAVAFDSATEATMHRFLYPGLFWRFQKLLCIGQEKRLKKSLDVVEAYMNDAVLDRKETPSDDLLSRFMKKRDANGKPLNSNVLQRIVLNFVLAGRDTSSVALSWFFWLVMNHPEVEKRIVAEIAAVLCQSRGSDRRRWVEEPLDFEEADKMIYLKAALAGNTAFVPFSAAGLQAGRRRRRVAGRHGGSGGPDRWLSVRGDRFELPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLVRYRLSPVPGHRVEQKMSLTLFMKNGLRVFLHPRKIEDAAVGVGAT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1072 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Dod08g1072 495 PANTHER CYTOCHROME P450 392 485 - -
Dod08g1072 495 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 4 373 - -
Dod08g1072 495 SUPERFAMILY Cytochrome P450 28 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 Pfam Cytochrome P450 401 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 Pfam Cytochrome P450 84 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 Gene3D Cytochrome P450 400 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 Gene3D Cytochrome P450 24 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dod08g1072 495 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 392 485 - -
Dod08g1072 495 PANTHER CYTOCHROME P450 4 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1072 Dod-Chr8 13672816 13674486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1072 1 483 Cytochrome P450 AT5G58860 67.255 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1072 K15401 - gmx:100788343 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1072 08 13672816 13674486 Dod08g1072 08 13672816 13674486 ECH