Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1064 ATGCACATCCTCGGTTACTCGAAGGGCACCACATCATCATCAGAACCCGAGCCAGTGCCACCACCCTCCATGGACGGTGATTTGGAGAACAACAACAAGGAGGTAATTTCGGACTTTGCTACTAATGCAAAGACACCACCACCAGCAGAGAACGTGATGGGGAGAAAGAAGTCAGAAGTAGTTCTAGTCACAAACAACAATGTTCGTTTCGAAATGCTTAGGAGTCTTAGGACCAATTTGCAAGAGGTCATCTTCGGCACTAAGCTTGCTGTGCTTTTTCCGGCAGTCCCTTTGGCTGTTGCTGCAGATTTTTATAGCTTCGGAAGGCCTTGGATTTTTGCGTTGAGCCTACTTGGACTCGCCCCGCTGGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCTTACTACACTGGCCCAACAGTTGGAGGGCTTCTGAATGCAACTTGTGGTAATGCAACCGAGATGATCATTGCACTATTAGCACTTCACAAGAACAAAGTACATGTTGTGAAGCTCTCCCTGCTAGGTTCCATTCTCTCAAACCTTCTACTGGTTCTTGGTAGTTCGCTCCTATGTGGTGGTTTAGCCAACCTTAAGAGGGAGCAAAGATATGACAGGAAACAGGCAGATGTAAACTCACTGCTTTTGTTGCTGGGGTTGTTGTGCCATTTGTTGCCATTAATGTTCAAATATGCCTTAGCAGGGGGCAATTATTCTATTTCTACGAGTACTCTTCAATTGTCAAGAGCAAGCAGCATTGTCATGCTTCTAGCATATGTTGCATATATCTTCTTCCAATTAAAAACTCATCGAACAATATTTGAAGCACAAGAGGAAGACGAAGATGAAGAGAAGGCCGTGATAGGATTTTGGAGTTCGTTTACGTGGTTGGTGGCTATGACGTTGGTCATATCTGTCCTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGTATTTCTGTTAGCTTCATTAGCATAATTTTGCTACCAATTGTTGGGAACGCTGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAGAACAAGTTGGACATATCTTTGGGCGTTGCTATGGGATCAGCAACTCAAATTTCCATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATACGAATGGACCTAGACTTTAATCTTCTTGAAACTGGGTGTCTTGCTTTTACAATTATTGTTACAGCGTTCACTTTACAGGATGGAACTTCCCACTACATGAAAGGAGTGGTTCTTTCTCTTTGTTACATTGTCATTGCTGCATGCTTTTTTGTTCTCAAAACTCCACTAATAGACCAAAATCTCAATTTCAGAGCTAAATCATCTTATGATGCCAAGACCACTTAA 1386 0.4293 MHILGYSKGTTSSSEPEPVPPPSMDGDLENNNKEVISDFATNAKTPPPAENVMGRKKSEVVLVTNNNVRFEMLRSLRTNLQEVIFGTKLAVLFPAVPLAVAADFYSFGRPWIFALSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALHKNKVHVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLMFKYALAGGNYSISTSTLQLSRASSIVMLLAYVAYIFFQLKTHRTIFEAQEEDEDEEKAVIGFWSSFTWLVAMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIRMDLDFNLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLSLCYIVIAACFFVLKTPLIDQNLNFRAKSSYDAKTT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1064 461 MobiDBLite consensus disorder prediction 1 30 - -
Dod08g1064 461 TIGRFAM cax: calcium/proton exchanger 94 437 IPR004798 GO:0006816|GO:0015369
Dod08g1064 461 TIGRFAM caca2: calcium/proton exchanger 76 437 - -
Dod08g1064 461 Gene3D - 289 438 IPR044880 -
Dod08g1064 461 Gene3D - 140 288 IPR044880 -
Dod08g1064 461 Pfam Sodium/calcium exchanger protein 111 268 IPR004837 GO:0016021|GO:0055085
Dod08g1064 461 Pfam Sodium/calcium exchanger protein 294 435 IPR004837 GO:0016021|GO:0055085
Dod08g1064 461 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 448 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod08g1064 461 PANTHER VACUOLAR CATION/PROTON EXCHANGER 26 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1064 Dod-Chr8 13442192 13449380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1064 55 442 Antiporters AT2G38170 68.766 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1064 K07300 - gmx:100816844 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1064 08 13442192 13449380 Dod08g1064 08 13442192 13449380 ECH