Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1046 ATGGCGGTTGAAGACGTGAAGTGTAATGGAAGCAAGAAGCGCAGAAGAGGCTCCATGAAAAGAAAGCTTCTTGTCAATGAGAGAGTCGAGGTGAGGAGTGTGGAAGAGGGGTTTCTAGGGTCATGGCACCCGGGGACAGTGATTCATTGTGGTAAGCAGAAGCGTCATGTGAAGTATGACAATGTTTTAGAAGAGGATGGATCAAGCTATGTTGTGGATGTGGTTAGTGCTTCACCTGTTCTGGATGGTGTTAGTGCTGATTCTTCACATTTCAATGAACGTGGGTTCATTAGGCCACTGCCCCCTTTATTTGAGTTTGGGGGATGGGACCTCCCATTTGGTCTGTGTGTTGATGTGAGTTATCAGGAAGCTTGGTGGGAAGGTGTTGTGTTTGATCACTGTAATGGAATGGAGGAGAGGAAGGTGTTCTTCCCTGATTTGGGTGATGAGATGAAGATTGGCATTCATCAGATGAGGATTACTCAGGACTGGGATGAGGCCACCGCGATTTGGAAGCCCCGGGGGAACTGGGTGTTCCTTGAATTGATTGAGGAGTATGAGAGGGAATCCTTTGTCACAGTCTCAGTGAAGCAAATTTGGTATGATGTAAGGGTTAGAAAGGAGTTTGAAACCAATATCAGGGACTGGACTTGCAATGTGAAGAAGGACTTGTGGAGAGACCTTGTGATGGAGATTGTTGGGGACTACTATGCTCTTACAATACAAGAGATTTTGCCAGCATTGAACCTTCCAGAGTATTTCTTCAAAGAAACATCAAAATTGGAGCCAATTGAACCAACTGGAAATGCTGATAGCTCTATGAAAAAAGATGACTTGGGAAACTTGATGGATACTGATCAAGACTGTGGTGGCTCCATTCCCATTCAGGAGAAATATGATGGGGCATCTGATGCGCAAATCATCGCAGACAAAAATGTGCCTGTGCCTGAGGAAGAAGATCTGGTGCTGGAGGAACCTATATCACCAATTCAACAGATCATTCCGGGAGTTCAGAATGAAGTTTCCCACAATAGACACTCGAGTCGTTGTAGGAACGTATGTTGGGAACCTCTGATACTGTCTGAAGTTGAATTCTGTCCTGGAGTTGTTGATCAATACATGCTTGGATGTGAGAGCAAGAAGATTAGGGAACTTTTGAAGACAAAAGTAAGAAAGCATCTTGCATACCTTGGATGGACAATTGAGTGGACCGAAGATAAATATGTTGCTGGGCGGCTACGGTACAGGTACAGGTCTCCTGGTACACAGGGCCAGAAGGTTTACACTTCAATACTTAAAGCCTGTAAACATATGCAACAAGACTCCAACGCAAACTCTCTGGTGTGCCAAAATGATACAGTTGAAAGTAGTATTTTACATCTGCTTTCTGATCAACACCTTACAAATCAGGATTCCATAAAAGTTGTTGTTGAACCTGAATTTTGTCCTCAAGCTGTTGTGAAATATTACTTCAATGCATTAGAGAACAACCATGCTGATAAAAGAAAATGGAAACTGAAAGCAAAGCAGCATCTGTTAGCGGAAGGATGGATCTTTGACTACCCAACTGCAAAAAGGAGGAGAACATTGTACAAGTCTCCAAAAAATCAGACTTTGGGCACACTTCAAGGTGCATGCAGACTATACATCAAAGAAAGTATTCCTAAATGGACTATTTCTGGCATGAAACCTTTGAGTCTGTCTGTTGTTAATGAAGAAAGTGTTGATCATCTTGATTGTGATGATCTATCACAGTGTGTCTCTCAGTTGCTTCAAAAGGAACCTGAATTGCATGCCATAGATGGTTTACCACAGATTACATCAACTGCGAATGAAAACCATAAACCCTCAAGGAATTCAAAGGCTAGTGCACGAAAGCGCAGGAGAAATGGATTACCTACACGTGTGCTGCGATCAAGCAAAAGGGTGCAGAAGGTGCTTGCCCCTGGTCTGTCACACCAAAAACCTCAAAATGTTCTGTCCTGGCTAATAGATTGCAATATGGTTTTGTCAAGATCTAAGGTCTTTTGCAAGGCAAAAGGTGGCAGCAATACTCATGTGGCAGAGGGGCGGATAAATCGTGATGGAATTAAGTGTAGCTGTTGTCAAAAGATGTATAGTCTTCATGGCTTTGTAAATCATGCTGGCGCCACTAGAAACTGCAGACCTTCTGCTAGTATCCTTCTGAAAGATGGTCGATCACTCTTAGATTGCCTGATTCAAGTAATGCATGATAAAAGGAAGAAGGAAACTATGGAGAAACCATGCAGTGTTCTTTGTCGAGGCGAAAATGACAACATTTGTTCTGCTTGTCAGTATGGTGGTGAACTTATTTTGTGTGACCAATGCCCTTCTGCCTTCCATATGAGGTGTCTTGGTTTGGAGGATATTCCTGATGGTGACTGGTTTTGTCCATCATGTCAATGCGGGATTTGCAGCCAAATCAAAATTGAAGGCGCTGAGGAGGGACATTTTCTTACTTGCATTCAGTGTGAACATAAATACCATGCTGGATGCCTGAGAAATAGATCAATAAATAAATCAAGAAGAAATATGGCAAACTGGTTCTGCAGAAAAGAGTGTGAACAGATATATGCTGGTCTGCATAAGCTATTAGGAAAGCCGGTTTCAGTGGATGGGGACAATCTAACTTGGACATTGTGGAAGTATGTCAACTCTGAGAATCGCGGTGTCGGTTCTACTAGAAATGACTACTTGGCAGAGTGTTACAGCAAACTCAATGTTGCACTTTCTGTGATGCATGAATGCTTTGAGCCCCTACAGAACCCTTCCTCTAACAGAGATCTTGTGGAAGATGTCATATTCAGCAGATGGTCAGAGCTTAACCGGACGAATTTCCAGGGATTCTATACTATACTTCTTGAGAGAGATGAAGAATTGATTAGTGTAGCAACTGTTAGGATATATGGAGAGAAAGTAGCAGAATTACCACTTGTAGGTACCAGATTTCAGTACCGTCGACTTGGAATGTGTCGCATTTTAATGAATGAGCTTGAGAAGATGCTCATGCATCTGGGGGTGGAGAGGCTAGTTCTGCCAGCAGTTCCTGGTGTGCTAGAAACATGGACCAATTCTTTTGGCTTTGACAAGATGACAGAGTTTGAAAGATCACAGTTTCTGGACTACACTTTCCTAGATTTCCAAGGAACTGTCATGTGCCAGAAGCTCTTGACAAAGACTCTATCCCCAGATTCGGTTTTAACAACAGAGATTCAACCAACACCACATGATCCTGTTTTACCTGTGAAGTGTAAAATCGAGTTTGACAAGTCAAGTTCAGCATCCGAAGAATGCCAAACAGTTGAGGAGGCTGATGAAAGTAGAATGACGGATCTACCCTTGGTGGAGTATGTCTCTCCTCTGTCTACTCCTTGA 3396 0.429 MAVEDVKCNGSKKRRRGSMKRKLLVNERVEVRSVEEGFLGSWHPGTVIHCGKQKRHVKYDNVLEEDGSSYVVDVVSASPVLDGVSADSSHFNERGFIRPLPPLFEFGGWDLPFGLCVDVSYQEAWWEGVVFDHCNGMEERKVFFPDLGDEMKIGIHQMRITQDWDEATAIWKPRGNWVFLELIEEYERESFVTVSVKQIWYDVRVRKEFETNIRDWTCNVKKDLWRDLVMEIVGDYYALTIQEILPALNLPEYFFKETSKLEPIEPTGNADSSMKKDDLGNLMDTDQDCGGSIPIQEKYDGASDAQIIADKNVPVPEEEDLVLEEPISPIQQIIPGVQNEVSHNRHSSRCRNVCWEPLILSEVEFCPGVVDQYMLGCESKKIRELLKTKVRKHLAYLGWTIEWTEDKYVAGRLRYRYRSPGTQGQKVYTSILKACKHMQQDSNANSLVCQNDTVESSILHLLSDQHLTNQDSIKVVVEPEFCPQAVVKYYFNALENNHADKRKWKLKAKQHLLAEGWIFDYPTAKRRRTLYKSPKNQTLGTLQGACRLYIKESIPKWTISGMKPLSLSVVNEESVDHLDCDDLSQCVSQLLQKEPELHAIDGLPQITSTANENHKPSRNSKASARKRRRNGLPTRVLRSSKRVQKVLAPGLSHQKPQNVLSWLIDCNMVLSRSKVFCKAKGGSNTHVAEGRINRDGIKCSCCQKMYSLHGFVNHAGATRNCRPSASILLKDGRSLLDCLIQVMHDKRKKETMEKPCSVLCRGENDNICSACQYGGELILCDQCPSAFHMRCLGLEDIPDGDWFCPSCQCGICSQIKIEGAEEGHFLTCIQCEHKYHAGCLRNRSINKSRRNMANWFCRKECEQIYAGLHKLLGKPVSVDGDNLTWTLWKYVNSENRGVGSTRNDYLAECYSKLNVALSVMHECFEPLQNPSSNRDLVEDVIFSRWSELNRTNFQGFYTILLERDEELISVATVRIYGEKVAELPLVGTRFQYRRLGMCRILMNELEKMLMHLGVERLVLPAVPGVLETWTNSFGFDKMTEFERSQFLDYTFLDFQGTVMCQKLLTKTLSPDSVLTTEIQPTPHDPVLPVKCKIEFDKSSSASEECQTVEEADESRMTDLPLVEYVSPLSTP* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1046 1131 Pfam Agenet domain 27 102 IPR008395 -
Dod08g1046 1131 Gene3D - 911 1047 - -
Dod08g1046 1131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 810 864 IPR013083 -
Dod08g1046 1131 Pfam PHD-finger 767 809 IPR019787 -
Dod08g1046 1131 CDD NAT_SF 959 1019 - -
Dod08g1046 1131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 759 809 IPR013083 -
Dod08g1046 1131 PANTHER PHD ZINC FINGER PROTEIN 10 1122 - -
Dod08g1046 1131 SUPERFAMILY FYVE/PHD zinc finger 745 808 IPR011011 -
Dod08g1046 1131 MobiDBLite consensus disorder prediction 606 633 - -
Dod08g1046 1131 ProSiteProfiles Zinc finger PHD-type profile. 765 810 IPR019787 -
Dod08g1046 1131 SMART PHD_3 809 861 IPR001965 -
Dod08g1046 1131 SMART PHD_3 767 808 IPR001965 -
Dod08g1046 1131 Pfam Tify domain binding domain 690 741 IPR032308 -
Dod08g1046 1131 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 901 1064 IPR000182 GO:0016407
Dod08g1046 1131 CDD PHD2_CHD_II 768 807 - -
Dod08g1046 1131 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 1122 - -
Dod08g1046 1131 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 919 1045 IPR016181 -
Dod08g1046 1131 SMART agenet_At_2 109 166 IPR014002 -
Dod08g1046 1131 SMART agenet_At_2 21 85 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1046 Dod-Chr8 13189143 13195954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1046 23 440 PHD Transcription Factor Family AT5G58610 34.989 6.94e-65 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dod08g1046 Agenet 5.2e-16 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1046 - - adu:107471457 1592.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0530 05 7617898 7632535 Dod08g1046 08 13189143 13195954 PCT