Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1042 ATGTCCGTGGTCGCGGTTTCGAATTCTCCGGTGTTCTCTCCATCTTCCTCCCTCTTCTGCGCGAAGCCTTCGATAATCTCTTCTACGGCGTCGTCTTGTTCTTCACCTTCTGCTTCCTCTTCTTCGAACTCAACTTCTTCGCCTTCTTCTCCTTTGCGTCTTCGGCTTCCGAAGCCACCACCACCGACCGTGTTCTCGAACTCTAATAATAACTCTTCTTCTTCGGGTGCCACGTCACCGAACGGCACCGTTTTGAAGAGGAAGAGGCCGGCGAGGCTCGACATACCGGTGAGTTCTTTGACTTTTGGGGTTCCCGCGACGCCATCGGCGGTGGCGCATGACGTGGTGGAGGAGGAGGGAGAAGGGTTCTCTGTGTACTGTAAGAGAGGAAGGAGGGAGTACATGGAGGATCGATACACTGCTGGTGATAATCTACGCAGTGAACACAAACTGGCTTTTTTTGGCATATTTGATGGGCACGGAGGTGCGAAAGCTGCTGAATTCGCAGCGCGTAACTTGGAGAAGAATGTCTTGGATGAAGTGATCATGATGGATCATGAGGATGATGTTGAGGAGGCTGTGAAGCGCGGCTACCTCAATACCGATTCTGATTTCTTGAAAGAGGATCTCCATGGCGGTTCCTGCTGTGTGACTGCATTGATCAAGAATGGCAACCTTGTGGTGTCCAATGCTGGCGATTGCCGCGCGGTTATTAGCAGAGGAGGTGTTGCAGAGGCCCTCACATCCGATCACCGGCCTTCAAGGAAAGATGAAAGGGACAGAATTGAGACCCTGGGTGGCTATGTTGATTTATGCCGCGGCGTTTGGAGGATCCAGGGATCCCTGGCTGTATCCAGGGGAATCGGAGATTCACACCTGAAACAATGGGTGATAGCAGAACCCGAGACCAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTAATCTTGGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAGGCAGTAGACATTGCTCGCACTTTTTGGGTAGGTAACAAGCAGCAGCCATTGCTGGCCTGTAAAAAGCTAGTAGATTTGTCGGTTTCGCGAGGCTCCATAGATGATACAAGTGTTATGCTGATCAAACTGGAGCACTATGTTTGA 1134 0.5044 MSVVAVSNSPVFSPSSSLFCAKPSIISSTASSCSSPSASSSSNSTSSPSSPLRLRLPKPPPPTVFSNSNNNSSSSGATSPNGTVLKRKRPARLDIPVSSLTFGVPATPSAVAHDVVEEEGEGFSVYCKRGRREYMEDRYTAGDNLRSEHKLAFFGIFDGHGGAKAAEFAARNLEKNVLDEVIMMDHEDDVEEAVKRGYLNTDSDFLKEDLHGGSCCVTALIKNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSRKDERDRIETLGGYVDLCRGVWRIQGSLAVSRGIGDSHLKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARTFWVGNKQQPLLACKKLVDLSVSRGSIDDTSVMLIKLEHYV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1042 377 Pfam Protein phosphatase 2C 123 365 IPR001932 -
Dod08g1042 377 ProSitePatterns PPM-type phosphatase domain signature. 153 161 IPR000222 GO:0043169
Dod08g1042 377 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 376 - -
Dod08g1042 377 PANTHER PROTEIN PHOSPHATASE 2C 3 376 IPR015655 GO:0004722|GO:0006470
Dod08g1042 377 Gene3D - 122 376 IPR036457 -
Dod08g1042 377 ProSiteProfiles PPM-type phosphatase domain profile. 122 373 IPR001932 -
Dod08g1042 377 SUPERFAMILY PP2C-like 123 374 IPR036457 -
Dod08g1042 377 CDD PP2Cc 122 373 IPR001932 -
Dod08g1042 377 MobiDBLite consensus disorder prediction 28 52 - -
Dod08g1042 377 MobiDBLite consensus disorder prediction 28 90 - -
Dod08g1042 377 MobiDBLite consensus disorder prediction 65 82 - -
Dod08g1042 377 SMART PP2C_4 116 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1042 Dod-Chr8 13112587 13114708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1042 4 377 PP2C-type Phosphatase Gene Family AT2G30020 62.850 1.17e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1042 K17506 - gmx:100797934 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1042 08 13112587 13114708 Dod08g1042 08 13112587 13114708 ECH