Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1041 ATGGCTTCATGGGTGAGAGGCAAGTGCATCGGTAAGGGCGCGTTTGGCACCGTCAACATCGCGGTGGCCAAATCGGACGGTCGAGTTTTCGCGGTGAAGTCCGTTGACATAAAAACGGGTCACCAAACTCAGTTAGAAGCGTTGGAGAACGAGATTCGGATTCTCAAGGTCCTCCCTCCGTCACCTCACGTGATCACCTTCCTCGGCGACGACGTCACGTGCGAGCGGGGCAAAGCGTCGTCGTTTCGCAACCTCCACTTGGAGTACCTTCCAGCTGGCACCGTCGCTGACGTGGACACCGCTGACGTGGACGAACGGTTAGTTAGGCGCCACGCCTGGTGCCTAACCCACGCGCTTCGCCATATCCACGCGCTCGGAATCGTTCACTGCGACGTTAAGGGGAGGAACGTGTTGGTTTCCGGCGCCGCCGTGAAACTCGCCGATTTCGGCTCGGCGGCGGAATTCTCAGGCGATAATGGCGCCGTTGGCTGGCGCGGGAGCCCGATGTGGATGGCGCCGGAGGTTGTTCGGCGGGAGTACCAGGGGCCGGAGTCCGACGTGTGGTCGCTAGGGTGCACGGTGATCGAGATGGTCACCGGAAAACCTGCCGTGGGAGGATCGCGGCGGCGCGGAAACGCTGAGTCGGATCGGTGTTTGAGGAGAGAGAGGAGTGAGAGGTGGAGCTGCGATCAGCTGCTTCAGCATCCATTTTTGATCGGCGAATCAAACGGAAAACTCGTGGAATCGTCGCCGAGGTGCGTTTTGGACTGGGTTGACTCGGGATTCTCCGAGTTGGGTGACTCGGACACCGAAACGGTGTTGGATGAATATGATGGTCAGGGTGTGGATTCGGCGAAGGGTAGGATTGGTAAATTGGCGACTATGGTGAGGGCAAATTGGGAATCACAGGGGTGGGTAGTGGTGAGAGCATTGGCATCTGACGAAGAAGCAACGACAATAACAGAATCGAGTGATGAAGAGGGAGGGGTAAATTGGGGATTTGGGAATGTGGGGAGGGTAGAATCGGGAGTGGAGGTGGTGGGGACTCGTTTGGAATATTCGGATTTTGGAAGGGTAAATCGGGGAATGAGGAAAAATGAGAGGTTGGTGTGGCGGTGCAACCGGGACGTAGGTGGTTGTGGATGTGGCTGTCGGTATGAGGGGGAAAAGCTGGATAGCACACATGATGCTGCCTTTCGTTTTGTGTCAACGATAACGAAGATCTGGATTTGGGAAATCAAAGATTAG 1248 0.5641 MASWVRGKCIGKGAFGTVNIAVAKSDGRVFAVKSVDIKTGHQTQLEALENEIRILKVLPPSPHVITFLGDDVTCERGKASSFRNLHLEYLPAGTVADVDTADVDERLVRRHAWCLTHALRHIHALGIVHCDVKGRNVLVSGAAVKLADFGSAAEFSGDNGAVGWRGSPMWMAPEVVRREYQGPESDVWSLGCTVIEMVTGKPAVGGSRRRGNAESDRCLRRERSERWSCDQLLQHPFLIGESNGKLVESSPRCVLDWVDSGFSELGDSDTETVLDEYDGQGVDSAKGRIGKLATMVRANWESQGWVVVRALASDEEATTITESSDEEGGVNWGFGNVGRVESGVEVVGTRLEYSDFGRVNRGMRKNERLVWRCNRDVGGCGCGCRYEGEKLDSTHDAAFRFVSTITKIWIWEIKD* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1041 415 ProSiteProfiles Protein kinase domain profile. 4 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1041 415 Gene3D Transferase(Phosphotransferase) domain 1 2 275 - -
Dod08g1041 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Dod08g1041 415 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dod08g1041 415 Pfam Protein kinase domain 6 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1041 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 216 339 - -
Dod08g1041 415 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 216 339 - -
Dod08g1041 415 SMART serkin_6 4 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g1041 415 Coils Coil 38 58 - -
Dod08g1041 415 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 203 - -
Dod08g1041 415 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 2 203 - -
Dod08g1041 415 SUPERFAMILY Protein kinase-like (PK-like) 3 257 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1041 Dod-Chr8 13092510 13094426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1041 4 323 MAP Kinase Kinase Kinase AT1G07150 51.744 1.10e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod08g1041 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1041 - - vun:114193591 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1041 08 13092510 13094426 Dod08g1041 08 13092510 13094426 ECH