LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod08g1034	ATGGACAACGTTATCTCAGTTTTCCCGAGCAAAACGCATCATCCTCAGACAACAAGATCATGGGATTTCATAGGCTTTCCCCAGCTGGTCAAAAGAACTAGCATAGAAAGTGACATAATTGTTGGAGTATTGGACGGTGGAATTTGGCTAGAGTCTAAAAGCTTCAGTGATGAAGGATTTGGCCCACCACCAAGGAAATGGAAGGGATCATGCCAAAACATCACCTGCAATAATAAAATCATTGGCGCAAAATACTATAACACACTAAAAGAGTTTGGGAAAGATGATATTAAATCTCCTATAGATACAAATGGCCATGGAACACATTGTGCATCCACAGCGGCTGGGAACTTGGTTGACTCTGCATCTCTACTAGGCTATGCATCAGGGATAGCCCGTGGAGGAGTTCCATCAGCACGCATTGCTATGTACAAAGTATGTTGGTCAAAAGGTTGCAATGACGATGACATTCTTGCCGCATTTCATGACGCAATTGTTGATGGAGTTGATATAATTTCTGCCTCAATTGGAGATGGCATGATAACTACCTTTAATTATTTCACTGATTCAATTGACATAGGAAGTTTCCATGCAATGGCAAAAGGCATATTAACATCAAATGGTATTGGTAATCAAGGTCCAAATCCTTCTTCTATGAAAATTTATTCACCCTGGTTACTTTCTGTGGCTGCTAGCTCTACTGACAGAAAGTTTCGCACTAATGTTCAATTGGGTGATGGCACACTTTATAAGGTATTTGTATTTCATTTGTCCAAAAAAAAAAATTTAGAGAACGATATTTTGGAATTCATTTTTACAATTATGACATTATTGCTCAGGCTTTGTTTGGAGAACTCTTTGAATGAACATTTAGTGAAAGGAAAGATTGTTCTATGTGAGGTTGTCGGGCCTGCAACACGTTATGGGCTCTTGTCTGGGGCAGCCGGTATGATACTTTCAGCCGCAGGCCCAAAAGATGGACAACAAATATATCCCGTGCCTGCAACTATTGTTGGGCATTATAGCTTTGGACGCATACTTTCTTACTCACGTTCAACGAGTAATTCAACAGCCACAATATTTAAGAGCAATAAAGTCAAAGATTCGATAGCCCCGTATATTGCTTCGTTCTCATCAAGAGGTCCAAATCCAATTACGCCAAACATTCTAAAGCCCGACTTCGCTGCCCCAGGAGTTAATATTCTCGCAGCATGGTCTCCATTGAACCCTATTTCACAAGCTGTAGGTGACAAAAGAAAAGAACATTACAATGTTAATAGTGGTACCTCAATGGCCTGTCCTCATGCTACCGGGGCAGCAACATATGTCAAATCATTTCACCCTGATTGGTCACCAGCTATGATCAAGTCTGCCCTTATGACCACTGCTTCTCCAATGAGTCCTTCTCTTAATCCTGAAGCCGAATTTGCATATGGAGCGGGGCAAATTAATCCAATTGAGGCGACAAATCCCGGCTTAGTGTATGACATTAGCGAAGCTGACTATATCAAGTTCTTGTGTGGAGAGGGTATTAAAACTGAAAGCCTTCGGAACCTCACTCAAGATAATAGCAGTTGTAGCGAGGAAATGAAAGCTGACAAGGGAGCTGTATTAAACCTTAACCTACCATCATTTTCTCTTTATTCAAAGATACCATCTTTTAGTATGACTTACAACAGAACGGTCACAAACGTTGGCTTGGCAAATTCTACTTATAAAGCCAAAGTAATATTTCCATCTATGATAGATATTCAAGTGATACCCAATACACTTTCCTTCACATCTGTGGGGCAGAAGAAGTCATTCTCGCTCATAATTGAAGGAACTATTAATCTGGAGACAATTTCTGCTTCTTTGGTTTGGGATGATGGCACTTTTCAAGTTAGAAGTCCTATTGTAGTGTTTCGTGACGAGGCTTTCCCAGCAAATATGAAACCGGGAAACATTACGATAAACAACAAAGTATAG	1968	0.404	MDNVISVFPSKTHHPQTTRSWDFIGFPQLVKRTSIESDIIVGVLDGGIWLESKSFSDEGFGPPPRKWKGSCQNITCNNKIIGAKYYNTLKEFGKDDIKSPIDTNGHGTHCASTAAGNLVDSASLLGYASGIARGGVPSARIAMYKVCWSKGCNDDDILAAFHDAIVDGVDIISASIGDGMITTFNYFTDSIDIGSFHAMAKGILTSNGIGNQGPNPSSMKIYSPWLLSVAASSTDRKFRTNVQLGDGTLYKVFVFHLSKKKNLENDILEFIFTIMTLLLRLCLENSLNEHLVKGKIVLCEVVGPATRYGLLSGAAGMILSAAGPKDGQQIYPVPATIVGHYSFGRILSYSRSTSNSTATIFKSNKVKDSIAPYIASFSSRGPNPITPNILKPDFAAPGVNILAAWSPLNPISQAVGDKRKEHYNVNSGTSMACPHATGAATYVKSFHPDWSPAMIKSALMTTASPMSPSLNPEAEFAYGAGQINPIEATNPGLVYDISEADYIKFLCGEGIKTESLRNLTQDNSSCSEEMKADKGAVLNLNLPSFSLYSKIPSFSMTYNRTVTNVGLANSTYKAKVIFPSMIDIQVIPNTLSFTSVGQKKSFSLIIEGTINLETISASLVWDDGTFQVRSPIVVFRDEAFPANMKPGNITINNKV*	656

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod08g1034	655	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	2	640	IPR045051	-
	Dod08g1034	655	Gene3D	-	506	636	-	-
	Dod08g1034	655	SUPERFAMILY	Subtilisin-like	16	493	IPR036852	GO:0004252\|GO:0006508
	Dod08g1034	655	PANTHER	CUCUMISIN-LIKE	2	640	-	-
	Dod08g1034	655	PRINTS	Subtilisin serine protease family (S8) signature	36	55	IPR015500	-
	Dod08g1034	655	PRINTS	Subtilisin serine protease family (S8) signature	427	443	IPR015500	-
	Dod08g1034	655	PRINTS	Subtilisin serine protease family (S8) signature	102	115	IPR015500	-
	Dod08g1034	655	Gene3D	Peptidase S8/S53 domain	38	502	IPR036852	GO:0004252\|GO:0006508
	Dod08g1034	655	CDD	Peptidases_S8_3	13	464	IPR034197	-
	Dod08g1034	655	Pfam	Subtilase family	37	481	IPR000209	GO:0006508\|GO:0008236
	Dod08g1034	655	ProSitePatterns	Serine proteases, subtilase family, histidine active site.	106	116	IPR022398	-
	Dod08g1034	655	CDD	PA_subtilisin_like	279	360	-	-
	Dod08g1034	655	ProSitePatterns	Serine proteases, subtilase family, serine active site.	428	438	IPR023828	-
	Dod08g1034	655	Gene3D	-	235	367	-	-
	Dod08g1034	655	Pfam	Fibronectin type-III domain	539	634	IPR041469	-
	Dod08g1034	655	ProSiteProfiles	Serine proteases, subtilase domain profile.	20	489	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod08g1034	Dod-Chr8	12949577	12953951	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod08g1034	1	635	Subtilisin-like Serine Gene Family	AT5G59190	48.018	0.0	555

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod08g1034	-		-	gmx:100787973	781.556