Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1005 ATGGCCACAGACGCACCCGCCAAATTCCAGAACCCAGATTTCCGGCCGGACTTCCACCCGCCGGAGAATAATGTCGCCGTGTCCCCCGCCGCTGCCCACGACGGCCTCCACTTCTGGCAGTTCATGATCGCGGGCTCCATCGCGGGCTGCGTCGAGCACATGGCCATGTTCCCCGTCGACACCGTCAAGACCCACATGCAGGCCCTCGGTTCCTGCCCAATTAAAACCGTAACGGTCCGTCAGGCCCTCCGTTCCATCCTCCAATCCGAAGGCCCATCGGCCCTCTACCGCGGCATCGGTGCCATGGGCCTCGGCGCGGGCCCGGCCCACGCCGTCTATTTCTCCGTCTACGAGACCTGCAAGAAACGTTTCTCAAAGGGTAATCCCAACAACCACGTCGCTCACGCAGCTTCGGGCGTTTTCGCAACGGTCTCAAGCGACGCCGTTTTCACCCCAATGGATATGGTTAAGCAGAGGCTGCAATTGAGTAATAGTGGATACAAGGGGGTTTGGGATTGCGTGAGGAGGGTTATGAGTGAGGAAGGGTTTGGGGCGTTTTATGCTTCGTATAGGACCACGGTTTTGATGAACGCGCCGTTCACGGCGGTGCATTTCTCCACTTACGAGGCGGCGAAGCGCGGGCTGATGGAGGTGTCGCCGGACAGCGTTGATGATGAGAGGTTGGTCGTTCATGCCACGGCGGGCGCTGCCGCCGGTGCTTTGGCTGCTGCGGTTACAACGCCGCTTGATGTTGTTAAGACTCAATTGCAGTGTCAGGGTGTCTGTGGATGCGATAGGTTCAAAAGCAGTTCAATTAAAGATGTTATCAAAACAATAGTGACAAAGGATGGATACAGAGGGCTGATGCGAGGATGGATTCCAAGGATGCTCTTTCATGCTCCTGCAGCTGCTATCTGCTGGTCTACATATGAAGCTGGAAAGTCCTTTTTCCAAGATCTCAATCAGCCAAAAGACATTGGCACTGTCACCTAA 993 0.5609 MATDAPAKFQNPDFRPDFHPPENNVAVSPAAAHDGLHFWQFMIAGSIAGCVEHMAMFPVDTVKTHMQALGSCPIKTVTVRQALRSILQSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKRFSKGNPNNHVAHAASGVFATVSSDAVFTPMDMVKQRLQLSNSGYKGVWDCVRRVMSEEGFGAFYASYRTTVLMNAPFTAVHFSTYEAAKRGLMEVSPDSVDDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSSSIKDVIKTIVTKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDLNQPKDIGTVT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1005 330 Pfam Mitochondrial carrier protein 131 217 IPR018108 -
Dod08g1005 330 Pfam Mitochondrial carrier protein 36 127 IPR018108 -
Dod08g1005 330 Pfam Mitochondrial carrier protein 227 319 IPR018108 -
Dod08g1005 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 316 IPR018108 -
Dod08g1005 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 123 IPR018108 -
Dod08g1005 330 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 324 - -
Dod08g1005 330 Gene3D Mitochondrial carrier domain 131 329 IPR023395 -
Dod08g1005 330 SUPERFAMILY Mitochondrial carrier 34 311 IPR023395 -
Dod08g1005 330 PANTHER MITOFERRIN-1-RELATED 1 324 - -
Dod08g1005 330 PRINTS Mitochondrial carrier protein signature 41 54 IPR002067 GO:0055085
Dod08g1005 330 PRINTS Mitochondrial carrier protein signature 145 163 IPR002067 GO:0055085
Dod08g1005 330 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Dod08g1005 330 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Dod08g1005 330 PRINTS Mitochondrial carrier protein signature 54 68 IPR002067 GO:0055085
Dod08g1005 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 214 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1005 Dod-Chr8 12507922 12511232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1005 1 321 Chloroplast and Mitochondria Gene Families AT1G07030 76.235 1.92e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1005 K15113 - gmx:100802640 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1005 08 12507922 12511232 Dod08g1005 08 12507922 12511232 ECH