Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0998 ATGTTCTCAGGTGATGAATGCAGTTTGGTTATGTGGACTGAGGCAATCACGATCTTGAAGAGGTTAAAGGAAGCAATCAGACTAGTTTTCATGGAGATGGAGAATCTGATCCGCCAGGACCCTGCAAGAGTGGCTGTTTCTGGTGGCGGGCTCCACCCAACAAACCGCTATGTGATGAACTTCCTTTGTGCTGCATGTGAATTTTGGGAGACCCTTGAACTTGCTTTTGAAAAAGATGAAGGGTCACCTTCAAATTCTTCTTCTTCTTGTTCTTCATTGTGTCTCCAGGTGGTTCAGATTTTGGAGTTGTTAGAGGAGTAA 321 0.4455 MFSGDECSLVMWTEAITILKRLKEAIRLVFMEMENLIRQDPARVAVSGGGLHPTNRYVMNFLCAACEFWETLELAFEKDEGSPSNSSSSCSSLCLQVVQILELLEE* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0998 106 Gene3D Exocyst complex component Exo70 1 106 - -
Dod08g0998 106 Coils Coil 19 39 - -
Dod08g0998 106 Pfam Exo70 exocyst complex subunit 2 102 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod08g0998 106 SUPERFAMILY Cullin repeat-like 11 105 IPR016159 -
Dod08g0998 106 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 105 - -
Dod08g0998 106 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 105 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0998 Dod-Chr8 12379619 12380765 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0998 1 105 EXO70 exocyst subunit family AT5G58430 57.143 1.03e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0998 K07195 - aprc:113848528 114.005