Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod08g0992 | ATGTTCAGGGAGCAAATCTCCCGTTCTTACCCGATAAACAGGAATGATATTTTCCATAACAACCTGGATAAGTTAGAAGCTCCTATTGGCAGGGTTCATCCAATAACCCAAAAAGCAATGAACTATATCGGTTGGTGTTGCTGGTCAAGAGAGAAGCTGGGGCGAATAGGAGCTGGAACATGGTCTTCATTCACTAAGGAGGTGGTTTCGCTACTGGAGGAATTGGAGAGAAAACTGAAAACCAACTCCAAGAGCTATGAAGACCCTGCTTTGCGCTCTCTTTTCATGATGCATAATAGGAGGTACATAGAAAACCAGATAAAAAAGTGGGATTTGGGAACCCACTTGAGCGGTGAGTGGCTCCAAAATAATATAGCACAAGTCCAGCAAAACCTTGAGCTCTATTACGGAAGCTCATGGATCAAGGTGTTGGACTATCTAAAGCTGGACAAGGAGTCACTTGCCCCTAATGTTGCCGCAGAGTCAATGAAAGAGAGGCTTGATTTGTTTAACTCACACTTCGACGAGTTGTGCATTGTTCAGTCTACATGGTTTCTCGAGGATGAGCAGCTTAGGGAAGAAATAATAACATACTTAGAAAACATTCTGTTGCCAGCGTATGGAAAATTCATTGGGGAGTTCATTCGTGTTCCTGCTCCAAATGCTTCTGACTATATTAAGTACGGAATTTTTCATATTGAAGCTCGCCTCAAGGGTTTGTTTCGACCTTTCGAGGAAGTAGAATGA | 747 | 0.4284 | MFREQISRSYPINRNDIFHNNLDKLEAPIGRVHPITQKAMNYIGWCCWSREKLGRIGAGTWSSFTKEVVSLLEELERKLKTNSKSYEDPALRSLFMMHNRRYIENQIKKWDLGTHLSGEWLQNNIAQVQQNLELYYGSSWIKVLDYLKLDKESLAPNVAAESMKERLDLFNSHFDELCIVQSTWFLEDEQLREEIITYLENILLPAYGKFIGEFIRVPAPNASDYIKYGIFHIEARLKGLFRPFEEVE* | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod08g0992 | 248 | SUPERFAMILY | Cullin repeat-like | 29 | 241 | IPR016159 | - | |
| Dod08g0992 | 248 | PANTHER | PROTEIN, PUTATIVE-RELATED | 29 | 242 | - | - | |
| Dod08g0992 | 248 | Gene3D | Exocyst complex component Exo70 | 8 | 246 | - | - | |
| Dod08g0992 | 248 | Pfam | Exo70 exocyst complex subunit | 28 | 237 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
| Dod08g0992 | 248 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 29 | 242 | IPR004140 | GO:0000145|GO:0006887 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod08g0992 | Dod-Chr8 | 12318100 | 12318846 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod08g0992 | 24 | 242 | EXO70 exocyst subunit family | AT5G58430 | 41.667 | 7.47e-45 | 157 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod08g0992 | - | K07195 | adu:107458221 | 237.269 |