Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0988 ATGAAGATTAAGTCCTTGCTCATCTGGATTCGAAGATGGCTAATGCAGCCACATGTATGGAGGTTAGTGGGTTTAGCTTCGACCGCAATTGGACTATTATGTTATGCTCTCAGCTCCTCCTTCATCAATCTATTCGGAGAGTGGAGCTTAATAAAAATCTCTGTTTATAGCATTTTCTGTATTATTACCTGCCTCGTAATTTTATTTGCAAAATTATGGCAACAAGTAAGGAGTCTCCACTTCGAAGCTCATATGGCCTTTTTTACTTTGACCATCACTTCTCTCTACTCATTCTTCTCCGACAAAGCCGTAAAAGGGAAACCAGATGCTTATAGCTTGGTATCCTATGCTGCGTTTTCTGTGACATCACTCAGCTTGTCAAGGCAAAGCCAGGCTCACTTCGGATTCGAAGTGGATCTGCTGTATTTCTTCTTAGGATGTCTAATAGTTCAATTCATGAAGATAAATTTGTGGTTAGGATTTGCTGGAGTGGGTTTCAGTTATTCCCTCATCATTCTACGTGTATCGCTAGACGCCCCATCAAGATACAGGCATCCAAGATTCCAAGATCAACATCGCCTCGTCGTTCAAGTGAACTCACAAGAATCCAACACCGTCGGTCCTGTTATTAGCACGTCTCAACAAGCTCAACAACCCAACTCATATATTACTACTGAGCCAAAGGTGTTGCAAAGTATAGAGGAACTTCGTTGGGCGAATCTGGCTATTGTAAACTTGCTCAAGTGTCGTTTGAGTAGATGTGTCAAAGATAAGGATGATGACCACGAGATTCCAACGGCACTAATGAACGACCACAACTTCCTGATGGATGAGCTTCCGTTGCAAGCAGTTGGGGACCTTCATGAAAACGCGAGGTTCATGATTGGAAGAGGTTTCGAGAAGGAGTGCTTGGACCAATACAGCAGCTGGCGGAGAGAGTTCTTACAATTAGCAGAAAAAGAGCTCAGCACAGAAGAAGAAATTGACGAGAGGGAGAGGATCAAGAGTTGGATTAAACTTTCCAATGTTTCACTCAGGATACTTTTTCCCAATGAGAGGAGACTCTGCGATCGCATCTTCTCGGGGATCTCTTCCAGCGCGGATCGCTCCTTCATGCAGGTTTGCAGCGGGTTCGCCACTGATCTGCTGAATTTTGCCGACGCTTTTGCGAATGGGAGACGATCGCTGAATCTTTTGCCCGGCATCCTCCAAGTGTTCGGTGCATTGTATGACCTAATTCCTGAGTTCCAGTCCGTGTTTTCTGACCAATGCAGTGTATCACTCTCGACCGAAGCGATCATGATCACAAAGAGATTATGGGAAGCAATTAGAGCCATATTGATGGAGTTGGAGGACCTGATCCGTTGTGATACGGGGCAGACAGCTATTCCTGGAGGGATTTGTTCCATTACTGTTGAATTGATGAACCATCTTAGCACTTTTGGAGAGGGCAATTGTTCTGCATTTTCTGTGGAGGTAACCAGGATAACAGAACTGCTGGAGAGGCATTTGGAAGCTAAGTCCAAAAACTACACCGATCCTGCCTTGGGCTTTGTTTTCTTGATGAATAATGAGAGGTACATGGTAAAAAAGGCAAAACAATATCGATTGGATAACATTTTGGGCGATGATTGGATCCAACGAAGAACTGCTAAAGTCTGA 1662 0.4416 MKIKSLLIWIRRWLMQPHVWRLVGLASTAIGLLCYALSSSFINLFGEWSLIKISVYSIFCIITCLVILFAKLWQQVRSLHFEAHMAFFTLTITSLYSFFSDKAVKGKPDAYSLVSYAAFSVTSLSLSRQSQAHFGFEVDLLYFFLGCLIVQFMKINLWLGFAGVGFSYSLIILRVSLDAPSRYRHPRFQDQHRLVVQVNSQESNTVGPVISTSQQAQQPNSYITTEPKVLQSIEELRWANLAIVNLLKCRLSRCVKDKDDDHEIPTALMNDHNFLMDELPLQAVGDLHENARFMIGRGFEKECLDQYSSWRREFLQLAEKELSTEEEIDERERIKSWIKLSNVSLRILFPNERRLCDRIFSGISSSADRSFMQVCSGFATDLLNFADAFANGRRSLNLLPGILQVFGALYDLIPEFQSVFSDQCSVSLSTEAIMITKRLWEAIRAILMELEDLIRCDTGQTAIPGGICSITVELMNHLSTFGEGNCSAFSVEVTRITELLERHLEAKSKNYTDPALGFVFLMNNERYMVKKAKQYRLDNILGDDWIQRRTAKV* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0988 553 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 553 IPR004140 GO:0000145|GO:0006887
Dod08g0988 553 Pfam Exo70 exocyst complex subunit 335 481 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod08g0988 553 Pfam Exo70 exocyst complex subunit 487 552 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod08g0988 553 PANTHER PROTEIN, PUTATIVE-RELATED 11 553 - -
Dod08g0988 553 Gene3D Exocyst complex component Exo70 205 553 - -
Dod08g0988 553 SUPERFAMILY Cullin repeat-like 268 552 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0988 Dod-Chr8 12288475 12291002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0988 260 553 EXO70 exocyst subunit family AT5G58430 49.693 2.36e-78 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0988 - - adu:107458262 729.939