Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0987 ATGGTTTACACCGTGGTAAGTTTCAGTATCAGTAGCATGATGTTATTTTTGAAGAAATGGAATATTTCAAGGAGTTTCTTGCTGAAAACTCATATGGATGTTCTGGTTTTGTTGCTCACCTCTTTGTACTCGTTTTTCTCTGATAAATCTGTGAACGGAAAACCAGACACATTAAGCTTGGTGTCATGTGTAGCCTTTGCTTCGATGTCTTTGTGCCTGTCGAGGCAGATTGACCTTGGGTTTGAAGCAGATCTCCTCAAATTCTTCCTTGGATGCCTAAGTGTTCAATTGATGAAGATCAACTTGTTACTCTCCATCATTGCAGCCATCTTCTGCTATGCTCTCATGATTATTCGTTCCAAATTGGAATCCCAATCGCATGTGGGAACTCAAAGAACGCAAGGCCATGTAACCGTAGAAATTGACGCTGCAAATGGAGTACAAAGAGGAGCTGATATCTACAGAAGAGACTTTCGATCTAGTTATAGCAGCAGCCAGCAAGAAATGCGGTCATTGAGGAGGGTGGATGATGGATACAATTGGAGAAAATATGAAGAGAAACCATTGAAGAGAAGGGGAAATCAGATCGCCTACTACAGATTCACACACACCAATTGTAGTGTGAAGAAAAAAGTTGAGAGAAATATAGGTGGGCATATTATTGATGTACTCTACAAGGGTACTCATGCCCATTGCAAGCCTAAATTTACTATAGAAAGGAACTCATCATCTGAATCTTTGTATTCTCTTCTACCTTCAGAGCCTTTCTCCACTGAAATACCTTATCAATCATCTTCCTCTATAGGCAGCAGTGGACAATTGGATAACGATGCTATGCCAGAGAGTTCATCATTATCAATATGA 864 0.4016 MVYTVVSFSISSMMLFLKKWNISRSFLLKTHMDVLVLLLTSLYSFFSDKSVNGKPDTLSLVSCVAFASMSLCLSRQIDLGFEADLLKFFLGCLSVQLMKINLLLSIIAAIFCYALMIIRSKLESQSHVGTQRTQGHVTVEIDAANGVQRGADIYRRDFRSSYSSSQQEMRSLRRVDDGYNWRKYEEKPLKRRGNQIAYYRFTHTNCSVKKKVERNIGGHIIDVLYKGTHAHCKPKFTIERNSSSESLYSLLPSEPFSTEIPYQSSSSIGSSGQLDNDAMPESSSLSI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0987 287 Gene3D WRKY domain 160 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0987 287 SMART WRKY_cls 175 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0987 287 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 157 285 IPR044810 GO:0003700
Dod08g0987 287 SUPERFAMILY WRKY DNA-binding domain 171 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0987 287 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 157 285 - -
Dod08g0987 287 Pfam WRKY DNA -binding domain 176 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0987 287 MobiDBLite consensus disorder prediction 260 287 - -
Dod08g0987 287 ProSiteProfiles WRKY domain profile. 170 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0987 Dod-Chr8 12285688 12287971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0987 173 235 WRKY Transcription Factor Family AT3G01080 52.381 8.74e-18 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g0987 WRKY 4.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0987 - - ccaj:109792596 323.553