Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0980 ATGGACTCGAGAAGGAGAGCCGCCGCCGGCACATCAATTGCCTGCAGGGAGTTCTTGCGATGGTTCCTCTCAACATTACAGTTTGAAGACTTAAATAACGAGGAAAACGGCGTTGACGATAAAGTGGACAGGATTTCAGGTTGGATCAAAGCTTTTGACATTGCTGTCCACTTACTGTTTCCCAATGAACGGAGACTTTGCGATCTTGTATTCCATTTCCATGGATTCCACTCCATACTTAGTGATCGCTCTTTTGCTATGGTTTGCCAGAAAATCACCGTTAGTCTGCTTGACTTCGCCAATTCTTTTGCTGTCGTGACCCGGTCGCCGAAGATTTTTTCAGCGGCGGTTGATGTGTTTACGAAACTGAGTGAGGTAATTCCTGTATTGAAATCACTGTTTCCTCATGAGTTAGGTGTGTCACTCGGGGATAAAGCAATCATGGTTTGGGGGAAGCTGGGTAGGGCTATCAGGGACTCTACCGAGAAATTGCCGTATGGGATCTACGAAGATAACATAGTTGCAGTTCCTGGAGGGATTTATTCGAGTACCTGCGATGTGATGAGGTGCATAAGAAAAGCCACGGAAGCTAACTTTATAATTGAACAATCTTACAAGGTAGATCCGGAAGACAGTAATGGAGTGTGGCTGGGTCGTTCACTTTCTGCCGAGATTGGTGAGATGATGGCGGGGTTAGAGGGCCTTGTGGAACACAATTCCAGCAACTGCATGGAACCTGCTTTGAGTTATGTTACCATGATGAATAACACCATGTACATTCAACAAGAAGTACTCTCTTTGATGACTGAGTTTCCTAGTGGCGATGGGGAAGTAAACCACTCTACATCCTTCGATCACATTTTCGGCCTTCAGATCCAGAAGCAAACAGAGAAATTCTGCCAAAGCCTTGAAGGCTATCTAAGAAGCTCGTGGAATTGGGTGCTGGGATTGGTGAAGGTAGACAGCAATGACGATGAGTCAGTGGTACCTGACGTAGCGGCAGAGTCAATGAAAGGAAAGCTCCAGTCATTCAACACTCGATTCTTTGAGATATGGTACTTTCAGTCTAAATGGTTTGCCACAGATGGTGTAAGGGAAATATTAATACAATCCATGAAAAATATGTTGTTGCCAGCATATGGAAACTTCATTGGAAGGTTCCAGCATATTCTTGGTGAGCATGATAATGCGTCTATTCATCATAGAATGTCTGAGTCGGACATCGAAGCACAACTCAACCAGTTGTTTCTTGGAGGCTACTCGATGAATCAGTAG 1275 0.4471 MDSRRRAAAGTSIACREFLRWFLSTLQFEDLNNEENGVDDKVDRISGWIKAFDIAVHLLFPNERRLCDLVFHFHGFHSILSDRSFAMVCQKITVSLLDFANSFAVVTRSPKIFSAAVDVFTKLSEVIPVLKSLFPHELGVSLGDKAIMVWGKLGRAIRDSTEKLPYGIYEDNIVAVPGGIYSSTCDVMRCIRKATEANFIIEQSYKVDPEDSNGVWLGRSLSAEIGEMMAGLEGLVEHNSSNCMEPALSYVTMMNNTMYIQQEVLSLMTEFPSGDGEVNHSTSFDHIFGLQIQKQTEKFCQSLEGYLRSSWNWVLGLVKVDSNDDESVVPDVAAESMKGKLQSFNTRFFEIWYFQSKWFATDGVREILIQSMKNMLLPAYGNFIGRFQHILGEHDNASIHHRMSESDIEAQLNQLFLGGYSMNQ* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0980 424 Pfam Exo70 exocyst complex subunit 48 414 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod08g0980 424 Gene3D Exocyst complex component Exo70 7 423 - -
Dod08g0980 424 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 416 IPR004140 GO:0000145|GO:0006887
Dod08g0980 424 SUPERFAMILY Cullin repeat-like 31 416 IPR016159 -
Dod08g0980 424 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 14 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0980 Dod-Chr8 12214364 12215638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0980 3 418 EXO70 exocyst subunit family AT5G58430 35.632 3.51e-62 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0980 K07195 - aip:107607041 235.728