Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0977 ATGAAAAATCGGGATTCAGGGTGCGCTAGGGAATGCCTACGAGTTGGTCTACTTTATCTGCTCTCCACCAATGATAAGATTTTCACAACATTGACTAGTCCTTTGCACCATCAGTCACTCCGAGCTAGGCGTCGCTACTCCACATCACTGCCGCTGCGCCACTGCTCCGCGCACTCCCGCTGTGCCGCTGCTACTCGCACTCCCGCCGCGCCTCTGCTCCGCTTCATTGCCGCTGCTCCACACACTCCTGCCGCGCCATTGCTCTGCCAAGCTTGCCGCTCCCTTAAGCTCGTACTTCAGATTTTGTCGAGGAAGTTAAAGAAAGGTTCTTTGCCAAATTTTTCTAAGGAAGTTAACGAAAGCTCACTTTACGATGGTATGATAGGTTTGGCGAACAAGAAAAGTGTTACTATTCAGCCTACTGGTAAAGATCAGTTTGTGTTGCTGGCAACAACTAAGACAAAGAAACAAAACAAGCCTTCTGTATTACTTCACAAATCTGTCATGAAGAATGAGTTCTATAGAATGGCAAAGGCTGGGCAAAATCAGCTAAGGAAAACATTGATTTTGATATTGAGATCAGGCATGACTAAATTGAAGTTCAAACGTGCTTACAATACATACACTGAACCCAGCATGGAGATTTTCAGGTGA 654 0.4618 MKNRDSGCARECLRVGLLYLLSTNDKIFTTLTSPLHHQSLRARRRYSTSLPLRHCSAHSRCAAATRTPAAPLLRFIAAAPHTPAAPLLCQACRSLKLVLQILSRKLKKGSLPNFSKEVNESSLYDGMIGLANKKSVTIQPTGKDQFVLLATTKTKKQNKPSVLLHKSVMKNEFYRMAKAGQNQLRKTLILILRSGMTKLKFKRAYNTYTEPSMEIFR* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0977 217 Gene3D - 99 209 - -
Dod08g0977 217 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 113 186 - -
Dod08g0977 217 PANTHER 60S RIBOSOMAL PROTEIN L28 113 186 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0977 Dod-Chr8 12174995 12180520 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0977 114 184 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 57.534 9.81e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0977 K02903 - gmx:100500189 95.5153