Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0974 ATGGCATCTTCTTCTGGTAGCTTAGACACTTCTGCGAACTCTTACACCAACAACTTCACCTTCTCAACACACCCCTTCATGACCACGTCCTTTTCTGACCTTTTAGCTTCTCCTACTGAAGACAAGCCTCGTGGTGGTGGTGGTATTGGCGTTGGTGTTGGTGGTGGGTTGTCTGAGAGAACTGGTTCTGGTGTTCCAAAATTCAAGTCCACACCACCACCTTCTTTGCCTCTCTCTCCACCGCCCGTTTCTCCTTCTTCTTACTTTGCTATCCCTGCAGGGTTGAGCCCTGCTGAGCTTCTTGACTCCCCTGTTCTCCTTAACTCTTCCAACATTTTGCCATCTCCAACAACTGGAGCATTTGCTGCTCAAAGCTACAACTGGAAGAGCAATAATTCTGTTGGGAACCAGAATGTTATCAAAGAAGAGAGAAACGTCTCAAGCTTCTCTTTTCAAACCCAACCAGGACCTCCTGCTACATCCTCAGCAATGTTTCAGTCTTCAATCAACAACACAGCTCAAACTCAACAACCATGGGATTTTCATGAAGCCACAAAGCAGGATAATTTCTCTTCAGGAAAGACCATGATGAAAACTGAAAACTCTTCTTCCATGCAGAGTTTCTCTCCTGAGATCGCCAGTGTCCAAACCAACCAAAACAATGGATACCACCAATCAGATTATGGCAATTACCAGCCACAATCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAGTATGGGCAAAAGCAAGTGAAAGGGAGTGAGAATCCAAGAAGTTACTACAAATGCACATACCCAAACTGCCCAACAAAGAAGAAGGTTGAGAGGTCCTTTGATGGGCAAATTACTGAGATTGTTTACAAGGGTACTCATAACCACCCCAAGCCTCAGAATACTAGGAGGAACTCATCATCATCTTCATCTTCTCTTCCAATTCCTCCTTCCAACCCCATCAGCTCTGAAGTACCAGATCAATCATATACCACACATGGCAGTGGACAAATGGATTCGGTTGCCACCCAAGAGAACTCATCAATATCAATGGGAGATGATGATTTTGAGCAGAGTTCTCAAAAGTGTAAATCAGGTGGAGATGATTTTGACGAAGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATATCAGCAGCTGGAAGCAGAACAGTGAGAGAACCAAGGGTTGTGGTTCAGACAACCAGTGACATAGATATCCTAGATGATGGGTACAGATGGAGAAAATATGGGCAGAAAGTAGTTAAGGGCAATCCAAATCCAAGGAGTTATTACAAGTGTACATACGCAGGTTGTCCAGTGAGGAAACATGTTGAGAGAGCCTCACATGACCTAAGGGCAGTGATCACAACCTATGAGGGAAAGCACAACCATGATGTCCCTGCAGCACGTGGCAGTGGTGTGAACAGATCACTGCCTAACAACACTGCAACAAACCCCAACACTGCAGCGATAAGGCCCTCAGCAGTGACACACCACAACACTAACAATTCTGTTCAGAGTCTTGGGGCACAGGCACCAGAAGGGCAATCGCCCTTCACACTAGAGATGCTTCAGAGCCCAGGAAGTTTTGGATTCTCAGGGTTTGGAAACCCAATGGGTTCCTACATGACTCAACAGCAGCAACAACCACCACAACCACTATCTGACAATGTTTTTTCTTCCAGAGCCAAGGAGGAGCCCAGAGATGACATGTTCTTTGAATCCTTGCTATGCTGA 1761 0.4554 MASSSGSLDTSANSYTNNFTFSTHPFMTTSFSDLLASPTEDKPRGGGGIGVGVGGGLSERTGSGVPKFKSTPPPSLPLSPPPVSPSSYFAIPAGLSPAELLDSPVLLNSSNILPSPTTGAFAAQSYNWKSNNSVGNQNVIKEERNVSSFSFQTQPGPPATSSAMFQSSINNTAQTQQPWDFHEATKQDNFSSGKTMMKTENSSSMQSFSPEIASVQTNQNNGYHQSDYGNYQPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSFDGQITEIVYKGTHNHPKPQNTRRNSSSSSSSLPIPPSNPISSEVPDQSYTTHGSGQMDSVATQENSSISMGDDDFEQSSQKCKSGGDDFDEDEPDAKRWKIEGENEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTYAGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGVNRSLPNNTATNPNTAAIRPSAVTHHNTNNSVQSLGAQAPEGQSPFTLEMLQSPGSFGFSGFGNPMGSYMTQQQQQPPQPLSDNVFSSRAKEEPRDDMFFESLLC* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0974 586 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 52 558 - -
Dod08g0974 586 MobiDBLite consensus disorder prediction 470 496 - -
Dod08g0974 586 MobiDBLite consensus disorder prediction 219 246 - -
Dod08g0974 586 Gene3D WRKY domain 402 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 MobiDBLite consensus disorder prediction 482 496 - -
Dod08g0974 586 ProSiteProfiles WRKY domain profile. 410 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 SUPERFAMILY WRKY DNA-binding domain 407 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 MobiDBLite consensus disorder prediction 544 567 - -
Dod08g0974 586 MobiDBLite consensus disorder prediction 34 82 - -
Dod08g0974 586 Gene3D WRKY domain 228 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 SMART WRKY_cls 415 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 Pfam WRKY DNA -binding domain 416 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 Pfam WRKY DNA -binding domain 243 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 MobiDBLite consensus disorder prediction 219 242 - -
Dod08g0974 586 ProSiteProfiles WRKY domain profile. 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 558 IPR044810 GO:0003700
Dod08g0974 586 MobiDBLite consensus disorder prediction 292 377 - -
Dod08g0974 586 MobiDBLite consensus disorder prediction 544 578 - -
Dod08g0974 586 MobiDBLite consensus disorder prediction 359 377 - -
Dod08g0974 586 SUPERFAMILY WRKY DNA-binding domain 241 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod08g0974 586 MobiDBLite consensus disorder prediction 297 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0974 Dod-Chr8 12153698 12156588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0974 65 585 WRKY Transcription Factor Family AT2G38470 47.243 3.73e-119 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod08g0974 WRKY 3.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0974 K13424 - gmx:100127385 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0974 08 12153698 12156588 Dod08g0974 08 12153698 12156588 ECH
Dod05g0455 05 6429712 6433459 Dod08g0974 08 12153698 12156588 PCT