Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0964 ATGGCTTCATCTGCTTTTCAATGGCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCCATAAATGGGACAAACACCAACTTCCCTGCTTACTCCTCACAGCTGAAGCAGCTCCTTTCCATCTCCCAGGTGCAGCTCAATAACCTTGCTTTTGCCTCTGATGCTGGCAAACTCTTTGGCTTTTTCGCTGGTGTGGCTGCTGTTTACCTACCCCTTTGGCTTGTCCTCATGATTGGCTCAACTCTTGGCTTAATTGGTTATGGTGTGCAATATCTCTTCATATCAAACCAAATTTCCAATCTCTCCTATTGGCATGTCTTCTTACTGACTGTTCTGGCAGGGAATAGCATTTGTTGGATTAACACTGTCTGCTATGTTGTCACAATAAGAAACTTCTCATCTGATTGCCAAGTTGCTGTTGGGTTAACAACAAGTTACCAAGGCCTAAGTGCAAAGATTTACACCAGCATTGTTGATGCTATTTCTGGACACAAAAGAGCTAGAGCCTTTCTTCTTTTGAACTCCTTCTTACCTGTGATAGTTGGCCTAATAGCAGCTCCTGTACTCAGAGAAATTGAGGTCACAAGGCCTAAACACATGCGTGTTGGATTTGTTGTTATGTTTGTTATCACAATTGCCACTGGAATTTATGCTGTGATCAGTAGCTTGCAATTTGTCTCAAGCAAAATATATCCAACGAGTAACCTGCTTGGTATTCTAGTGTCCCTTTTCCTCCCTTTGCTGGTTCCATTTTCAGTGAAGATCAAGGAGCTAGTAGGATCATGGCAAACAAATAGAGAAAAACTAAGGGTGTATCACTTTACAGCGGAGGAGAGCAACAATGAAGAGAGGACAGAGAATGAGGTGAAGGAGGGTGAAGATAGCACAAAAGTTCAAGAGCTAGGTGCCAGAGAAGAAACTGGAGTGAAATTGATGCTGAGAAGAATAGATTTCTGGTTATACTTCTTTGTCTATTTATTTGGTGCAACGCTTGGTCTAGTGTTTCTCAATAACTTAGGACAAATAGCGGAATCCCGGGGTTGCTCTGCTACTTCATCTTTGGTGTCTTTGTCTTCCTCTTTTGGCTTCTTTGGCCGTCTCATGCCATCTCTAATGGACTACTGTTGCAGGGGTAAGTATGCAATATCAAGACCAGCTTCTATGGTGGCAATGATGGCACCAACAGCCGGGGCATTCTTCTTACTTCTCAATAAGACTGACCTTGCCCTCTACATCAGCACTGCTATAATTGGGGTGTGTACTGGAGCAATCACTTCTATTTCTGTTTCCACCACAAGTGAGCTATTTGGCACCAAGAATTTCTCTGTGAACCATAATGTTGTGGTGGCCAACATTCCAATGGGGTCCTTTCTGTTTGGTTACTCTGCTGCCCTTGTTTACCGTAAGGAAGGGCATGAACATGGGAAATGCATGGGCATGGAATGCTATAGAAGCACTTTCATCATCTGGGGTTCCCTTTGTTTCTTTGGCACTTTGTTGGCTTTGATTCTGCATGCCAGAACTCGCAAGTTTTACTCACATAAACTATAG 1548 0.4328 MASSAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGFFAGVAAVYLPLWLVLMIGSTLGLIGYGVQYLFISNQISNLSYWHVFLLTVLAGNSICWINTVCYVVTIRNFSSDCQVAVGLTTSYQGLSAKIYTSIVDAISGHKRARAFLLLNSFLPVIVGLIAAPVLREIEVTRPKHMRVGFVVMFVITIATGIYAVISSLQFVSSKIYPTSNLLGILVSLFLPLLVPFSVKIKELVGSWQTNREKLRVYHFTAEESNNEERTENEVKEGEDSTKVQELGAREETGVKLMLRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLMPSLMDYCCRGKYAISRPASMVAMMAPTAGAFFLLLNKTDLALYISTAIIGVCTGAITSISVSTTSELFGTKNFSVNHNVVVANIPMGSFLFGYSAALVYRKEGHEHGKCMGMECYRSTFIIWGSLCFFGTLLALILHARTRKFYSHKL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0964 515 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 514 - -
Dod08g0964 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 514 - -
Dod08g0964 515 SUPERFAMILY MFS general substrate transporter 6 509 IPR036259 -
Dod08g0964 515 Pfam Nodulin-like 7 250 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0964 Dod-Chr8 11958214 11960481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0964 1 514 Nodulin-like Gene Family AT2G30300 49.524 1.75e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0964 - - gmx:100808034 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0964 08 11958214 11960481 Dod08g0964 08 11958214 11960481 ECH
Dod05g0444 05 6285657 6287842 Dod08g0964 08 11958214 11960481 PCT