Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0952 ATGTTAGCCATGGCCTCTTCTCAATTGACCTCAAATTGTTATCAATCAACATGCCCCCAAGCCCTCTCTATCATCAGATCTGCCGTGATCAGTGCAGTTGCCAAAGAGCATCGCATGGGCGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGCACGTTTCTCTTCCTTCATCTTCGATTACGGATGTGATGCATCAGTACTTTTGGATGACACTCCAAGCTTTACTGGAGAGAAATCAGCTGGTGCAAATGTGAACTCTCTGAGAGGGTTTGAAGTAATTGATGACATTAAGACTAAAGTGGAGGCTGCTTGTCCTGGAGTTGTTTCTTGTGCAGATATTCTCGCTCTGGCTGCCCGTGATTCCGTAGTTACATTGGGGGGTCCATCATGGAATGTTGTGTTAGGCAGAAGAGACTCAACCACGGCAAGTAAAGATGCTGCCACTAAAGATATTCCATCCCCTCTGATGGATCTAAAGGATCTTATATCTAATTTTGCAAATAAAGGGTTTGACACCAAGGAGATGGTAACCCTCTCAGGAGCACACACAACTGGTCAAGCCAGATGTCAACTTTTCAGAGGCAGGCTTTACAATGAAACAAGTAGCATTGAGTCAACCTTTGCTACATCACTCAAGTCAAATTGTCCAAGTAATGGTGGTGACACCAACCTCTCCCCACTTGATGTCACCACCAGTGTGCTATTTGACAATGCCTACTTCAAGAACCTTGTCAACCAAAAAGGACTTCTACATTCAGATCAGCAACTCTTCAGTGGTGGTTCCACAGACTCTCAGGTCACTGCCTATGGCAACAACCCTGCAAGTTTCTATGCAGACTTTGCTAGTGCCATGGTGAAGATGGGAAACCTTAGCCCTCTAACAGGGAAAAATGGCGAGATTCGGACTAACTGCCGCAAAGTTAACTAA 939 0.4505 MLAMASSQLTSNCYQSTCPQALSIIRSAVISAVAKEHRMGASLLRLHFHDCFVNARFSSFIFDYGCDASVLLDDTPSFTGEKSAGANVNSLRGFEVIDDIKTKVEAACPGVVSCADILALAARDSVVTLGGPSWNVVLGRRDSTTASKDAATKDIPSPLMDLKDLISNFANKGFDTKEMVTLSGAHTTGQARCQLFRGRLYNETSSIESTFATSLKSNCPSNGGDTNLSPLDVTTSVLFDNAYFKNLVNQKGLLHSDQQLFSGGSTDSQVTAYGNNPASFYADFASAMVKMGNLSPLTGKNGEIRTNCRKVN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0952 312 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 18 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 230 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 246 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 42 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Plant peroxidase signature 286 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PANTHER PEROXIDASE 72-RELATED 5 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 Pfam Peroxidase 26 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 SUPERFAMILY Heme-dependent peroxidases 8 312 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 Gene3D Peroxidase, domain 2 156 291 - -
Dod08g0952 312 ProSiteProfiles Plant heme peroxidase family profile. 8 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 CDD secretory_peroxidase 8 311 IPR033905 GO:0004601|GO:0042744
Dod08g0952 312 Gene3D - 14 312 - -
Dod08g0952 312 ProSitePatterns Peroxidases active site signature. 40 51 IPR019794 GO:0004601
Dod08g0952 312 PRINTS Haem peroxidase superfamily signature 40 54 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0952 312 PANTHER PEROXIDASE 5 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0952 Dod-Chr8 11779121 11781630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0952 4 312 Peroxidase AT5G05340 60.772 7.78e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0952 K00430 - gmx:100777191 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0952 08 11779121 11781630 Dod08g0952 08 11779121 11781630 ECH
Dod08g0952 08 11779121 11781630 Dod08g0946 08 11695521 11699849 ECH