Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0950 ATGGCTCCTCATCATCTCCAATACTTGCTTGTGATTGTTATGGCCACTTTGGCAAAATTTATGATCCCTGCTCATGCTGATGATGATGCTGTGCTGACCGCTGATTATTATGACAGCGTGTGCCCTCAGGCATTCTCAACCATAAAGGCAGTTGTTACGCAAGCACTCCTTTCGGAAACACGCATGGGACCATCTTTGCTGCGTTTGCATTTCCATGACTGCTTCGTTAATGGATGTGATGGTTCAGTTTTGTTAGACGATACGCCTTCAATGAGGGGAGAGAAGACGGCACTCCCCAATTTCGAATCACTACGAGGTTTCGAGGTGGTTGATGAAATCAAAGCAGCGGTTGACCAAGCGTGCAATGGTCCTGTGGTGTCATGCGCTGATATCTTGGCAATAGCAGCTCGTGATTCTGTAGCCCTATTGGGAGGTCAACAATATTGGTACCAAGTGTTATTAGGAAGAAGGGATGCAACAAATGCAAGCTGGGATGATGCAAATAGTAATCTTCCTCCCCCATTTTCCAACTTCTCAGATCTTCTCACATCCTTCCAGTCTCATGGCTTGGAGCTTAAAGATCTAGTGGTCCTCTCTGGTGGCCACACCATTGGATTTTCCAGGTGCTCTTTGTTCAGGAGCAGGCTCTACAACGACACCAACATAGACTCCCAATTTGCAGCATCTTTGACAGATTCCTGCCCTCTAAGTGGTGCTGACAGCAACTTAGCAACATTGGATTCTACCCCTACAACATTTGACACTGCATATTACACTGATTTGATGAACCAAAGGGGCCTCCTACATTCTGATCAAGAGCTCTATAAGGGTGATGGTAGTGAGAGTGACTTGTTGGTGCAGCAATACAGCAGTGACCCTAGTGCTTTTGCTACAGACTTTGCAGCTTCGATGATTAACCTGGGAAATATTAAGCCTCTTACTGGAACTGAGGGAGAGATCAGGAGTAACTGCAGAAAAGTGAACTAA 987 0.459 MAPHHLQYLLVIVMATLAKFMIPAHADDDAVLTADYYDSVCPQAFSTIKAVVTQALLSETRMGPSLLRLHFHDCFVNGCDGSVLLDDTPSMRGEKTALPNFESLRGFEVVDEIKAAVDQACNGPVVSCADILAIAARDSVALLGGQQYWYQVLLGRRDATNASWDDANSNLPPPFSNFSDLLTSFQSHGLELKDLVVLSGGHTIGFSRCSLFRSRLYNDTNIDSQFAASLTDSCPLSGADSNLATLDSTPTTFDTAYYTDLMNQRGLLHSDQELYKGDGSESDLLVQQYSSDPSAFATDFAASMINLGNIKPLTGTEGEIRSNCRKVN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0950 328 Pfam Peroxidase 49 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Dod08g0950 328 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Dod08g0950 328 Gene3D Peroxidase, domain 2 172 308 - -
Dod08g0950 328 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Dod08g0950 328 PANTHER CATIONIC PEROXIDASE 10 327 - -
Dod08g0950 328 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 PANTHER PEROXIDASE 72-RELATED 10 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod08g0950 328 Gene3D - 36 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0950 Dod-Chr8 11765026 11768119 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0950 29 328 Peroxidase AT5G05340 54.785 4.41e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0950 K00430 - gmx:100810852 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0950 08 11765026 11768119 Dod08g0950 08 11765026 11768119 ECH
Dod05g0430 05 5997117 6002730 Dod08g0950 08 11765026 11768119 PCT