Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0938 ATGGGTAATAACAGGTTCAAGTTTTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGCAGATCAAGGAAAACAAATGGCTCTAATGTTATGAAGAACAAAGTCACCTCACCAACAACATCTCAAAGGTCACTTCCAAGGTATTCAAACTATTTCTCCAATGAACAAATTATCAGAGCTGGTAAGTTATACAACACACCTATTCACACCAAAGACTTGGACATTCCATTCATTGATTCACCAAGTAGGTCATCATCCAAGAGAAGGTCTAGGAGAAAAACCATTTACAAGCCTTCGCCCACTATTGCCTCCTCTTCTTTCAAAGCCAGTTCCAATTATGATTCAAATAATAATTGGACTAAGCCATATCAACTTGAGTCTCCAGACTATGATATCTCTTCCATTGAAAGTTCTTCTGAGTCTGACCATGAATATGTTTATTCTGAGTCTGAGTGTGACAGCTTTTCTGTCCCTGACTTGCTTAATGGGATAGAGACTAATTGCAGTTGCAGAGTTAGCTCTTCAACTAATGACATCATCATTGACATGAACAATGAACCCTTCAAAGGGAATCCAGAAAAGCTTGATGGGTTTGATACAATGTCACAGATTGGTCTTGCTCCAATTTTGACACAACCAGTGAGGTTTGATGATAAGGTCATCGAAGCCATTGAGCTGAGAAGTTCAACTGAACTGGATGATGAGCTGCAGGTTGATCAGTCTCTCCATGCCAAAGCTGCCAAAGAGGAGAGCAGTAGATCTCAAAGGAGGCGAAAAAGCGGCCATGTATCTCGAAAGCCCTCAACCAATTCTGCAGGCGTAAGGCTAAGGGTCAATTCTCCAAAACTGGCAAGCAGAAAGATTCAAGCCTATGCAAGAAGGAGTGTGTCATCCAGTGGAAGTAAAGGTTCAAGAAATGCAGGCTTTCCGGAGGGCTTTGCTGTGGTTAAGTCCTCATATGATCCACAGAGTGACTTCAGGGATTCGATGTTGGAGATGATAGTGGAGAACAATATCCGTGCATCGAAAGGTTTGGAGGACTTGCTTGCCTGCTATCTTTCCTTGAATTCTAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAGATTTGGTTTGATATGGCTCAACTTAGAGTGTAA 1155 0.4121 MGNNRFKFSDMMPNAWFYKLKDMSRSRKTNGSNVMKNKVTSPTTSQRSLPRYSNYFSNEQIIRAGKLYNTPIHTKDLDIPFIDSPSRSSSKRRSRRKTIYKPSPTIASSSFKASSNYDSNNNWTKPYQLESPDYDISSIESSSESDHEYVYSESECDSFSVPDLLNGIETNCSCRVSSSTNDIIIDMNNEPFKGNPEKLDGFDTMSQIGLAPILTQPVRFDDKVIEAIELRSSTELDDELQVDQSLHAKAAKEESSRSQRRRKSGHVSRKPSTNSAGVRLRVNSPKLASRKIQAYARRSVSSSGSKGSRNAGFPEGFAVVKSSYDPQSDFRDSMLEMIVENNIRASKGLEDLLACYLSLNSSEYHDLIVKAFEQIWFDMAQLRV* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0938 384 MobiDBLite consensus disorder prediction 79 102 - -
Dod08g0938 384 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 382 - -
Dod08g0938 384 MobiDBLite consensus disorder prediction 247 280 - -
Dod08g0938 384 ProSiteProfiles OVATE domain profile. 319 378 IPR006458 -
Dod08g0938 384 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 317 379 IPR006458 -
Dod08g0938 384 MobiDBLite consensus disorder prediction 27 52 - -
Dod08g0938 384 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Dod08g0938 384 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 382 IPR038933 GO:0045892
Dod08g0938 384 MobiDBLite consensus disorder prediction 247 261 - -
Dod08g0938 384 Pfam Transcriptional repressor, ovate 323 379 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0938 Dod-Chr8 11507234 11508854 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod08g0938 Ovate 2.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0938 - - gmx:100780926 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0938 08 11507234 11508854 Dod08g0938 08 11507234 11508854 ECH
Dod05g0422 05 5901980 5903645 Dod08g0938 08 11507234 11508854 PCT