Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0937 ATGTTCACTTCTGGATCACTGAGAGAGTACCGGAAGAAATATAAGCGAGTCAGCATAGAAGCGATAAAGAGTTGGGCTCGGCAAATCTTACAGGGTGTTGTTTATCTACATGGTCATGATCCACCAGTAATCCATAGGGACCTCAAATGTGATAACATATTTGTCAACGGCCACCTTGGACAAGTAAAAATTGGTGACCTGGGACTAGCTGCAATTCTTCGTGGTTCGCAGTCAGCTCATAGTGTTATAGGCACCCCAGAGTTCATGGCTCCAGAATTGTATGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTTTATTGGAAATGCTTACATCCGAGTATCCATATAGTGAATGTGCTAATCCAGCACAGATTTACAAGAAAGTTACATCGGGAAAGCTACCAATGGCATTTTTTCGGATTGAAGACATGGAAGCACAGAGGTTTATTGGAAGATGCCTAGTACCGGCATCAAAGAGACCATCGGCAAAAGATTTGCTGCTTGACCCTTTTCTTCTGCGTGGCGATTCATCATCATCAACAACAAAGTTTGGAATTCAGGAGCCACTTTTGCAAATTGAGATGGAAAAGCTGCAGTTGAGTGATGATTTACCTAGGACTGAAATGAAAATAATAGGGAAGCTGAATCCTGAAGATGATACTATCTTTCTCCAAGTGCAAATTTCTGATAAGGATGGTTCTGTCAGGAACGTATTTTTTCCCTTTGATATTTTAACCGACACCGCCATCGATGTCGCAACAGAGATGGTAAAAGAATTGGAGATTGCTGATTGGGAACCTTTTGAAATAGCAAATATGATTGATGGAGAAGTATCTGCTCTCCTACCACATAGGAGACCAGGTAATTATTCAGATGCCTTGCACACATTCAGTTATCAGGACGATGATGACGATGGACCTCATCATCATTTTCGCTCGTTCTCTACTTGTTCATCATCCCAAGAATCAATGTCAGGCTTAGTCAGTAAATCTGAGGGTATTCCAAGTGGATATTATTGGCTCCATGATGATTCGCTTGATGATACCAGTTCAAGGTGCTCTTCACAAGGGACATATTCCAACTTGAATTATTATTCTGCTGATGAACAGGACTACAATGTGGCTTCTATCAGAAAAGATAAAATTCCCATCATGAAGAGTACTCACAAGTGCACAAGGTTTTTCCCTGGTGAAGACTTGAGCAACTGCAACCAGTGTAAAGATTTAGCAGGATCACAGACTCCTTCCACTAGTAAAAGTAAAGGGTTGATAGAGAATAGGAGACTAACAAGGAACAGGTCATTGATTGATATAAGGAGCCAATTATTGCACCGATCACTGGTTGAAGAGGTGCACAAAAGAAGGCTATTCAAGACTGTTGGTGCTGTGGAGAATATTGGTTTTCAGGCACCTTGTGATGTTTCCACACCAAAGTCACAGAAAATTGAGAACTCTTCAAGGAGTGGCAAAAAGTTGAGATAA 1497 0.4102 MFTSGSLREYRKKYKRVSIEAIKSWARQILQGVVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCLLEMLTSEYPYSECANPAQIYKKVTSGKLPMAFFRIEDMEAQRFIGRCLVPASKRPSAKDLLLDPFLLRGDSSSSTTKFGIQEPLLQIEMEKLQLSDDLPRTEMKIIGKLNPEDDTIFLQVQISDKDGSVRNVFFPFDILTDTAIDVATEMVKELEIADWEPFEIANMIDGEVSALLPHRRPGNYSDALHTFSYQDDDDDGPHHHFRSFSTCSSSQESMSGLVSKSEGIPSGYYWLHDDSLDDTSSRCSSQGTYSNLNYYSADEQDYNVASIRKDKIPIMKSTHKCTRFFPGEDLSNCNQCKDLAGSQTPSTSKSKGLIENRRLTRNRSLIDIRSQLLHRSLVEEVHKRRLFKTVGAVENIGFQAPCDVSTPKSQKIENSSRSGKKLR* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0937 498 MobiDBLite consensus disorder prediction 479 498 - -
Dod08g0937 498 SUPERFAMILY Protein kinase-like (PK-like) 4 178 IPR011009 -
Dod08g0937 498 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 486 - -
Dod08g0937 498 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0937 498 Pfam Protein kinase domain 4 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0937 498 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0937 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Dod08g0937 498 Gene3D Transferase(Phosphotransferase) domain 1 2 182 - -
Dod08g0937 498 PANTHER WNK KINASE 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0937 Dod-Chr8 11494788 11499580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0937 1 480 MAP Kinase Kinase Kinase AT5G58350 58.763 3.03e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod08g0937 Pkinase 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0937 K08867 - gmx:100272203 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0937 08 11494788 11499580 Dod08g0937 08 11494788 11499580 ECH
Dod05g0421 05 5893378 5899414 Dod08g0937 08 11494788 11499580 PCT