Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0933 ATGGGGAACCGGAGAAGAGCAGCGCGGGGAGGCCAAGGCATAGGCACAGCAGCTCCGTGGATGGGTCTACGACGACGTCGTTTGGGGAGATCATGGATGCGAAGAAAGCTATGCCTCCTGATAAGCTCGCTGAGCTTTGGGCTATCGATCCCAAGCGCTGCCAAAAGAATACTTGCAAATCGACAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCTCGGTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCCCAGTTGACCCTATACCAGAGGGACACAAATGGTCTGAGTACTGAAAATACGGAGCTGAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACAGCTTCGTGATGCTCTTAATGAAGCATTGAAGAAGGAAGTTGAGAGGCTTAAGGTTGCTACTGGGGAGATAATGAGCCCCACTGAATCTTTTAATCTGGGAATGCACCAGATGCCATTTACAGGATCAAATTTGTTTCCAATCCCACCACAATCAGGTCCTTCTTGTCATCAGAACATCCAGGCGCTGCCATTTGCTCACACCCGATCTAGCATGCCAACTCATCAACTGCAACAAACAAATTCTCACCCACTCTCAGAAATATTGCAAAATGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGGTCAACCCTTGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACTACATTTTGA 753 0.4847 MGNRRRAARGGQGIGTAAPWMGLRRRRLGRSWMRRKLCLLISSLSFGLSIPSAAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTNGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEIMSPTESFNLGMHQMPFTGSNLFPIPPQSGPSCHQNIQALPFAHTRSSMPTHQLQQTNSHPLSEILQNDQLGRLQGLDISSKGSTLVKSEGPSLSASESSTTF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0933 250 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 51 247 - -
Dod08g0933 250 Pfam bZIP transcription factor 54 109 IPR004827 GO:0003700|GO:0006355
Dod08g0933 250 Coils Coil 68 95 - -
Dod08g0933 250 MobiDBLite consensus disorder prediction 230 250 - -
Dod08g0933 250 Coils Coil 103 147 - -
Dod08g0933 250 SMART brlzneu 48 112 IPR004827 GO:0003700|GO:0006355
Dod08g0933 250 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 113 IPR004827 GO:0003700|GO:0006355
Dod08g0933 250 PANTHER ATBZIP TRANSCRIPTION FACTOR 51 247 - -
Dod08g0933 250 CDD bZIP_plant_RF2 54 102 IPR044759 GO:0003700|GO:0006355
Dod08g0933 250 SUPERFAMILY Leucine zipper domain 54 103 IPR046347 GO:0003700|GO:0006355
Dod08g0933 250 Gene3D - 53 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0933 Dod-Chr8 11436729 11438932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0933 51 250 bZIP Transcription Factor Family AT2G40620 56.087 4.94e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod08g0933 bZIP_1 4.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0933 - - gmx:100815680 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0933 08 11436729 11438932 Dod08g0933 08 11436729 11438932 ECH
Dod05g0408 05 5706691 5710106 Dod08g0933 08 11436729 11438932 PCT