Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0928 ATGGCAGATGAAACACAAAATGATTTGAAAGAGGAGGTTGCAGAAATTGCACCATTTGATCCTACTAAGAAGAAGAAGAAGAAAAAAGTTACCATTGTAGACGCTGCTGATGATTCGGTGGACAAGTTGGCTGAGAAGACAGAAAACCTTTCAGTTTCGGACGGGGTTGATACTGCATTTTCTGGTTTGAAAAAGAAGAAGAAGAAGCCAGTTGAAATCAGTAACTTGATTGATGAGAGTGGAGATGCAAATGAAGATTTGGATGATCATGCTGAAGATGATGATGGAGAAGAAGAGGCTTCTTTGAAGCCTCGTTATCCTTGGGAAGGAACTGATCGTGATTATGAGTACGAGGAGCTTCTTGGCAGGGTGTTTAACATCCTACGTGAGAATAATCCAGAACTTGCTGGAGATCGACGAAGAACAGTTATGAGGCCACCTCAAGTTCTTCGTGAGGGCACAAAGAAAACCGTGTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAATTGGGTACAAGTGGATCCCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATATGTCATTTGCCTTGGATGCAAGAGCCCAGACACTATACTTTCAAAGGAGAACCGTCTGTTCTTTCTTCGGTGTGAGAAGTGTGGATCTGGAAGATCAGTTGCTCCAATCAAAGCTGGCTTTGTTGCTCGTGTTGGCCGTAGGAACACAGGGGACATGATTTTGGTCTTAGTTTTTATCCTTTTTGAAACTAGCCGGGGATATGTACCTTTTCCGAAGGAAAAAAAAAAAATTTTACTGTGTATTGTATTGCTTACCATATGCACTATAATTTTGTGTTTTTTTTTTTGGGTCTGA 948 0.4146 MADETQNDLKEEVAEIAPFDPTKKKKKKKVTIVDAADDSVDKLAEKTENLSVSDGVDTAFSGLKKKKKKPVEISNLIDESGDANEDLDDHAEDDDGEEEASLKPRYPWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGDMILVLVFILFETSRGYVPFPKEKKKILLCIVLLTICTIILCFFFWV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0928 315 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Dod08g0928 315 Gene3D - 112 254 - -
Dod08g0928 315 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 268 IPR045196 GO:0003743|GO:0006413
Dod08g0928 315 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Dod08g0928 315 MobiDBLite consensus disorder prediction 1 31 - -
Dod08g0928 315 Pfam Domain found in IF2B/IF5 139 247 IPR002735 GO:0003743|GO:0006413
Dod08g0928 315 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Dod08g0928 315 MobiDBLite consensus disorder prediction 1 22 - -
Dod08g0928 315 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 1 268 - -
Dod08g0928 315 MobiDBLite consensus disorder prediction 79 96 - -
Dod08g0928 315 MobiDBLite consensus disorder prediction 62 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0928 Dod-Chr8 11368651 11373381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0928 1 267 Eukaryotic Initiation Factors Gene Family AT5G20920 75.836 1.60e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0928 K03238 - gmx:100783618 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0928 08 11368651 11373381 Dod08g0928 08 11368651 11373381 ECH