Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0920 ATGTTCTTGTTTAGTTTGATCACTTTGATGCTGCGGTTGCTTTACAAAGGGTTACAAAGCAATAATCTTACCGTTGCGCTGAAGGGCAAGGATAGCATCCAGCAGCTTAGTTCAGGAGAGGAAATGAAGAGGTCTGGTGTTCCCTACGTTTCTGGCATGCATCTTTCAAAGGGTTGCAAGTGTGAAGTTGTTTTGTGCTTGTGGTTATGCTGCTATTTGTTACTGGCTGCTGGTCAGAATGGTGTCACTGACCAAGATGAAGTTGATGCATTGAGAAGCATAAAGGCAAGTTTGTTTGATATCAATGGAAATTTGAGCAATTGGGATAGTGGAGATCCATGCAATTCTAAATGGACAGGGGTTTTATGCCACAACAGAACATTAGCCGATGGCAATCTACATGTTCAACAATTGTATGACTCTAATCTTCTACTCTACATTTCTTTAAAACATATCATGATAATCCAATCTCATGTTTTTCTTTTTCTGGACTTTATGTGGAACAAGATAAGTGGGACTATACCGAAAGAAATTGGCAACATCAAATCCTTGAGACTTTTGCTCTTGAATGGAAATCAATTAACAGGTCAACTTCCAGATGAGCTTGGGTATCTTCCAAACCTGAATAGAATACAAATTGATGTGAACAATATTAATGGAACTATACCTGTATCATTTGCAAACCTCAATGCCACACAGCACTTTCACATGAACAACAATTCAATTAGCGGGCAAATCCCAAAAGAGCTTTCCCAGTTAGGAAGCCTTATGCATCTCCTTCTTGACAACAACAATTTAACAGGAAATCTTCCCCCTGAGCTCTCCAACATGCCAAGCTTAAGGATACTTCAGCTTGATAACAATAACTTCAGTGGAAGTACTATTCCGGATTCTTACAGTGACATGTCAAAATTGTTGAAATTGAGCCTTAGGAACTGCCGCTTGCAAGGACCAATTCCGGATTTAAGCAAGATACCAAACCTTTATTATGTTGACCTCAGTGACAATCAGCTGAATGAAACAATTCCTACCAATAAGCTTTCTCAAAACATCACAACCATTATTTTATCAAACAACAAGCTCAGAGGAACTGTTCCATCCAATTTTTCGGGTCTTCCACATCTTCAGAAATTGTCACTTGCAAACAACTCACTGAGTGGAAATGTTTCTTCCTCCATTTGGCAGAACAAGACCTCAAATCCAACAGAAAGCCTTACTGTAGACTTGCAAAATAATCAACTCACAAGCATATCAGGCAGTGTTAGTCTTCCTGCAAATGTCACACTCCAGCTTGAGGGAAATCCTCTATGCTCAAATGAGGCCTTTGCTCAGTTCTGTAGATCTGAAGGTGCCAACGGCACAACCACTATCACCAGTCCTGATTGTCCAAGTCAAGCATGCCCCCCACCTTATGAATACACTGTGGAGTGTTTCTGTGCAGCTCCTTTGTTTGTCATTTTCCGGTTGAAAAGTCCAGGATTTTCATATTTCCCTCCATATGTGAATACATGTCAGAGGTACCTGACTGATGGCCTTAATGTGGACACCAGTCAGCTACTCATTAGCAATTATTCATGGGACGAAGGGCCTCGGCTGAGAATGCACTTGAAGCTTTTCCCTGAATATATTGACAGCAATAGCACCCGTCGTTTCAATGACAGTGAGATTGCTCGGATCAGAAACATGCTCGCTGGATGGGAAATTGGAGACAATGACATGCTTGGGCCATATGAACTTATGGACTTTATTCTGCAAGGTCCTTACGCTGAGGTGATTGTCAACACTTCAGGTTCAGGGATAAGCAAGGGTGCACTGGCTGGAATAATCATAGGTGCAATTGCCTGTACAGTTACATTATCTGCAATTGTTACTCTTCTTATATTGAGATCAAGGTTGAATTATTACCGTGTACTTTCCAAACGGCGTCAAGATGCAACTAGGATCTCAATAAAGATTGAAGGTGTAAGAGCATTTGATTATGAAGAATTGGCCTCAGCTACAGACAATTTTAGTGACTCTGCTCAAGTTGGAAGGGGAGGGTATGGGAAGGTTTATAAGGGCATTATTTCTGATGGAACTGTTGTCGCCATAAAATGTGCAGAAGAAGGATCACTACAAGGTGAGAGGGAGTTCCTCACAGAAATACAATTGCTGTCAAGGTTACATCACCGCAACCTTGTGTCTCTGCTTGGATACTGTGATGAAGGGGGTGAACAGATGCTGGTTTATGAATACATGCCCAATGGAAATCTAAGAGATCACCTCAACCCTTATTCAAGACAACCTCTTAGTTTTGCCATGAGACTGAAGATTGCTCTAGGGTCAACTAAAGGTCTTCTCTATCTACACACTGAAGCTGATCCTCCAATATTCCACCGGGATGTCAAGGCCAGCAACATCTTATTGGACTCTAAGTTCACAGCAAAAGTTGCTGATTTTGGGCTTTCAAGACTTGCCCCAGTTCCAGATGTTGAAGGAGTTGTGCCTGGTCATGTATCTACGGTGGTGAAAGGGACCCCGGTTACTGTGGATTACCAATCTGGTGGGCTAGCTTCAGTTATTGATACACGTATGGGGCCTTGTCCTTCTGAATATTTGGAGCCATTTTTGGCTTTGGCCCTCAAGTGTTGCCAAGATGCACCAGATGATCGGCCTAAAATGGCAGAAGTAGTTAGAGAGCTTGAGAGCATATGGTCCATGATGCCTGAGTCCAATAATGCCAAGGGAGCTGAATATGTGAGCAGTGATTCAGGAACAAACTTCAGTTCACAACCTTCATCATCTACTATAAAGACTCCTTTTATATCATTAGAAATTTCAGGTAGTGACCTTGTTAGTGGAGATGTACCAACCATCAAACCCAGATAA 2868 0.4181 MFLFSLITLMLRLLYKGLQSNNLTVALKGKDSIQQLSSGEEMKRSGVPYVSGMHLSKGCKCEVVLCLWLCCYLLLAAGQNGVTDQDEVDALRSIKASLFDINGNLSNWDSGDPCNSKWTGVLCHNRTLADGNLHVQQLYDSNLLLYISLKHIMIIQSHVFLFLDFMWNKISGTIPKEIGNIKSLRLLLLNGNQLTGQLPDELGYLPNLNRIQIDVNNINGTIPVSFANLNATQHFHMNNNSISGQIPKELSQLGSLMHLLLDNNNLTGNLPPELSNMPSLRILQLDNNNFSGSTIPDSYSDMSKLLKLSLRNCRLQGPIPDLSKIPNLYYVDLSDNQLNETIPTNKLSQNITTIILSNNKLRGTVPSNFSGLPHLQKLSLANNSLSGNVSSSIWQNKTSNPTESLTVDLQNNQLTSISGSVSLPANVTLQLEGNPLCSNEAFAQFCRSEGANGTTTITSPDCPSQACPPPYEYTVECFCAAPLFVIFRLKSPGFSYFPPYVNTCQRYLTDGLNVDTSQLLISNYSWDEGPRLRMHLKLFPEYIDSNSTRRFNDSEIARIRNMLAGWEIGDNDMLGPYELMDFILQGPYAEVIVNTSGSGISKGALAGIIIGAIACTVTLSAIVTLLILRSRLNYYRVLSKRRQDATRISIKIEGVRAFDYEELASATDNFSDSAQVGRGGYGKVYKGIISDGTVVAIKCAEEGSLQGEREFLTEIQLLSRLHHRNLVSLLGYCDEGGEQMLVYEYMPNGNLRDHLNPYSRQPLSFAMRLKIALGSTKGLLYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVPDVEGVVPGHVSTVVKGTPVTVDYQSGGLASVIDTRMGPCPSEYLEPFLALALKCCQDAPDDRPKMAEVVRELESIWSMMPESNNAKGAEYVSSDSGTNFSSQPSSSTIKTPFISLEISGSDLVSGDVPTIKPR* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0920 955 Pfam Leucine rich repeat N-terminal domain 85 123 IPR013210 -
Dod08g0920 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Dod08g0920 955 Gene3D Ribonuclease Inhibitor 351 468 IPR032675 -
Dod08g0920 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 64 844 - -
Dod08g0920 955 SUPERFAMILY L domain-like 98 463 - -
Dod08g0920 955 SMART serkin_6 670 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0920 955 SUPERFAMILY Protein kinase-like (PK-like) 655 908 IPR011009 -
Dod08g0920 955 ProSiteProfiles Protein kinase domain profile. 670 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0920 955 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 845 927 - -
Dod08g0920 955 MobiDBLite consensus disorder prediction 909 928 - -
Dod08g0920 955 Pfam Protein tyrosine and serine/threonine kinase 674 818 IPR001245 GO:0004672|GO:0006468
Dod08g0920 955 Gene3D Transferase(Phosphotransferase) domain 1 746 843 - -
Dod08g0920 955 Gene3D Transferase(Phosphotransferase) domain 1 844 916 - -
Dod08g0920 955 Gene3D Phosphorylase Kinase; domain 1 640 745 - -
Dod08g0920 955 Gene3D Ribonuclease Inhibitor 83 350 IPR032675 -
Dod08g0920 955 ProSiteProfiles Leucine-rich repeat profile. 404 424 IPR001611 GO:0005515
Dod08g0920 955 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Dod08g0920 955 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 64 844 - -
Dod08g0920 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 845 927 - -
Dod08g0920 955 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0920 Dod-Chr8 11249065 11258212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0920 70 903 Receptor kinase-like Gene Family AT5G01950 52.296 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod08g0920 PK_Tyr_Ser-Thr 5.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0920 - - gmx:100801035 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0920 08 11249065 11258212 Dod08g0920 08 11249065 11258212 ECH