Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0915 ATGCTTGCCGCTGCTGCTTCTGCTTCTAGGCACATTCTTCAACGCGATGCAAGACCCACCATTGCTTTGGGTTCTCATAGTGCAAGTGGCAATCGCGTTCGGTCGCTCTTTACTGCTTCTGGAATCAGCAGCAGCTACCCAATTCGCAGAACCATATGCAGAAGAGGTTACGGTTTTGGAACCAACTTGAAATTGAATCATCATCATCATCATCAACAACAACACAGAACATGCCCATGTTTGCTCTTTTCTATAAAGGGGTTCCTCTCTGATTCATCAACTTCCTCTTCCTCATCAAATTCTTCTCATCCTCCTTCACTATATGGCAGAGTCACCAGACCTTACTTGCTACAACCTAGTTCAACGATAGATGGAAGAGCATTGTTCTCAACTTCAACTAAAACTGATGATGGAACCAAAAAGGAGAACCAAAAAACTACTTCAAACATTGCTAAGTCATCTCCCGAGGGACGAGTTGCTGATATGAAGATCCTTCGCACGCTTGCCAGTTACTTGTGGATGAAAGATAATCTCGAGTTTCGGTTTCGGGTTGTTGCTGCTTTGGGATTTCTCGTTGGAGCTAAGGTTTTGAATGTTCAGGTCCCGTTCTTGTTCAAGCTTGCAGTTGACTGGTTGACGACTACCATGGGCAATGCTGGTGCTCTTGCTTCTTTTACGGCCGCAAATTCCACTGCAGTGGCTCTTTTTGCTACACCGGTAGCTGTGTTGATCGGATATGGGATTGCGCGTACCGGAGCTTCTGCTTTCAATGAACTGCGGACTGCGGTGTTTTCTAATGTGGCACTGCGAACAATTCGATTAGTATCAAGGAAGGTCTTCTCACATTTGCATGACCTTGACCTTCGGTATCATCTAAGTCGAGAAACTGGCGCATTAAGTAGAATAATTGATCGTGGCAGCCGTGCAATAAATTTTATTCTCTCATCTATGGTGTTCAATGTAGTACCCACCATATTAGAGATATCTATGGTATCAGGTATACTGGCCTACAAATTTGGAGCTCCTTTTGCATGGATTACTTCCCTATCAGTTGCTGCTTATGTTATTTTTACACTGACTATCACACAGTGGAGAACTAAGTTCAGGAAAGCCATGAATAAGGCAGATAATGATGCTGGTACAAGGGCTGTTGATTCACTTATTAATTATGAGACTGTCAAATATTTCAATAATGAAGATTATGAAGCTGAAAAATATGATGAGTACCTAAAGAGGTACGAGGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTTGTTGAACTTTGGTCAAAATATTATATTTAGTACAGCTCTTTCAACAGCAATGGTTCTGTGTTCCTATGGGATTATGGATGGCAGGATGACTGTTGGTGACTTGGTGATGGTGAATGGGCTTCTCTTCCAATTATCTCTTCCGCTCAATTTCCTAGGCAGTGTTTATCGTGAAACTATACAGAGTCTAGTTGACATGAAGTCCATGTTTCAATTACTTGAGGAAAGTACTGATATTAAGGATAAAGACAATGCAAAACATCTGAGATTTAATGGGGGGAGCATCGAATTTGAGAATGTACATTTCAGCTACCTGACAGAAAGGAAGATACTAGATGGAATATCACTTGTTGTGCCGGCTGGTAAAAGTGTGGCAATTGTTGGGACTAGTGGAAGTGGAAAATCGACCATTCTTAGATTGCTATTCAGGTTTTTTGATCCTCATTCTGGAAGTATAAAGATAGATGGGCAAGATATTCGGGAGGTAACCCTTGAGAGTTTGCGGAAGTCTATTGGTGTTGTTCCTCAAGACACTGTACTTTTCAATGATACTATATTTCATAACATTCACTATGGTCGACTTTCAGCAACAAAAGAGGAGGTCTATGAAGCTGCTCGTCAAGCCGCAATTCATGACACGATCATGAATTTTCCTGAAAAATATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGTGGTGGTGAGAAGCAACGTGTTGCTCTAGCTCGTGCATTCTTGAAAGCACCTGCTATACTGTTGTGCGATGAGGCTACAAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCATTGAAGTCACTTGCAAATAATCGAACTTCCATGTTCGTTGCGCACAGGCTTACCACCGCAATGCAGTGTGATGAGATCATAGTTTTGGAAAATGGAAAGGTGATTGAACAAGGACCCCATGAAGTGCTCTTATCAAAAGGGGGAAGATACGCACAGCTTTGGGGACAGCAAAATAACACAGTTGATGCAATTGATGCAGCCGTCAAATTGGGGGCATAA 2313 0.4237 MLAAAASASRHILQRDARPTIALGSHSASGNRVRSLFTASGISSSYPIRRTICRRGYGFGTNLKLNHHHHHQQQHRTCPCLLFSIKGFLSDSSTSSSSSNSSHPPSLYGRVTRPYLLQPSSTIDGRALFSTSTKTDDGTKKENQKTTSNIAKSSPEGRVADMKILRTLASYLWMKDNLEFRFRVVAALGFLVGAKVLNVQVPFLFKLAVDWLTTTMGNAGALASFTAANSTAVALFATPVAVLIGYGIARTGASAFNELRTAVFSNVALRTIRLVSRKVFSHLHDLDLRYHLSRETGALSRIIDRGSRAINFILSSMVFNVVPTILEISMVSGILAYKFGAPFAWITSLSVAAYVIFTLTITQWRTKFRKAMNKADNDAGTRAVDSLINYETVKYFNNEDYEAEKYDEYLKRYEDAALKTQRSLALLNFGQNIIFSTALSTAMVLCSYGIMDGRMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEESTDIKDKDNAKHLRFNGGSIEFENVHFSYLTERKILDGISLVVPAGKSVAIVGTSGSGKSTILRLLFRFFDPHSGSIKIDGQDIREVTLESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAARQAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPAILLCDEATSALDSTTEAEILSALKSLANNRTSMFVAHRLTTAMQCDEIIVLENGKVIEQGPHEVLLSKGGRYAQLWGQQNNTVDAIDAAVKLGA* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0915 770 PANTHER BNAA10G12020D PROTEIN 116 760 - -
Dod08g0915 770 MobiDBLite consensus disorder prediction 129 153 - -
Dod08g0915 770 CDD ABCC_ATM1_transporter 520 755 - -
Dod08g0915 770 ProSitePatterns ABC transporters family signature. 657 671 IPR017871 GO:0005524
Dod08g0915 770 SUPERFAMILY ABC transporter transmembrane region 179 499 IPR036640 GO:0005524|GO:0016021
Dod08g0915 770 Pfam ABC transporter transmembrane region 187 473 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod08g0915 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 755 IPR027417 -
Dod08g0915 770 Gene3D ABC transporter type 1, transmembrane domain 171 510 IPR036640 GO:0005524|GO:0016021
Dod08g0915 770 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 520 754 IPR003439 GO:0005524
Dod08g0915 770 SMART AAA_5 545 731 IPR003593 -
Dod08g0915 770 CDD ABC_6TM_ATM1_ABCB7 187 494 - -
Dod08g0915 770 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 185 486 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Dod08g0915 770 Gene3D - 512 767 IPR027417 -
Dod08g0915 770 Pfam ABC transporter 536 685 IPR003439 GO:0005524
Dod08g0915 770 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 116 760 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0915 Dod-Chr8 11174371 11189123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0915 356 756 Calmodulin-binding Proteins AT2G36910 36.386 9.97e-66 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0915 K05662 - gmx:100779975 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0915 08 11174371 11189123 Dod08g0915 08 11174371 11189123 ECH