Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0903 ATGGCACATTCACCAGATTCCGATTCAAAACTTGCCAGTTGGGAAGCCACCAGCAAGCATATCATCAAACCAGGAGTAGAAGAACAAGAAGAAGATGGCTTCTTGTTTGCAAGGCAAATGGCATCTTCTTTTGTGGTTCCAATGGTTTTGAGGACCGCAATTGAGCTTGGCGTCTTTGACATCATAGCCAAAGCTGGCGAAGGTGCCAAGCTCTCTGCAGAGGACATTGTGGCTCAAATTGGCACCAACAACCCTGCGGCCCCCACTATGCTGGATCGTGTTCTTACGCTGTTGGCATGTCACTCTATATTACATTGCTCTGTTGCTGAAGATTCACAAGGCCTAATTGGGTTGCCTCAGAGGTTGTATAGCCTCTCTCCTCGGTCCAAGTACTTTGTCACCGATACTGATGGCGTCTCATTAGGGCCCTGGTTGGAGATGCATCTGGATAAGGTCTTTTACCAAAGCTGTGAACTGAAAGGAGCGATCCTGGAAGGAGGCATACCATTCAACAGGGTTTATGGCATGCATGCCTTTGAGTATTCAAAGACTGATCCCAGGTTCAACGAGGTTTTCAACAAAGGTATGTTCAACTCTTCCACTATACTAATGAAGAAGATTCTTGAGCTCTACAAAGGCTTCGAGCACATCAATAGACTGGTGGATGTTGGTGGTGGTCTTGGGGCCAATCTCAAATTGATCATTTCCAAACACCCTCATATCCAGGGTATCAATTTTGACTTGCCTCATGTCATAGAACATGCTCCAGTTTGTGATGGTGTGGAGCACGTTGGAGGAGATATGTTTAAAAGCGTTCCTAATGGAGATGCCATTTTTATGAAGAGGATACTTCCTGATTGGGGTTATGAATGCTGCTTGAAGCTCTTGAAGAATTGCCACAAGGCTATTCCCAATGAAGGGAAGGTCATTGTGGTAGAAACAGTTCTTCCCATTCTGCCTGAGCCAACATCTATTGCCAAGAACGCTTTTAGATCTGACATGCTCATGATGACTCAAATGCCCGAAGGGAAAGCACGAACCAACCAAGATTTGGTGGATTTGGCAACAAAATCTGGATTTAGTGGCATCAAATTCATATGCCACATCTCTAGCTTATGGGTTATGGAACTCTACAAGTAG 1140 0.4509 MAHSPDSDSKLASWEATSKHIIKPGVEEQEEDGFLFARQMASSFVVPMVLRTAIELGVFDIIAKAGEGAKLSAEDIVAQIGTNNPAAPTMLDRVLTLLACHSILHCSVAEDSQGLIGLPQRLYSLSPRSKYFVTDTDGVSLGPWLEMHLDKVFYQSCELKGAILEGGIPFNRVYGMHAFEYSKTDPRFNEVFNKGMFNSSTILMKKILELYKGFEHINRLVDVGGGLGANLKLIISKHPHIQGINFDLPHVIEHAPVCDGVEHVGGDMFKSVPNGDAIFMKRILPDWGYECCLKLLKNCHKAIPNEGKVIVVETVLPILPEPTSIAKNAFRSDMLMMTQMPEGKARTNQDLVDLATKSGFSGIKFICHISSLWVMELYK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0903 379 CDD AdoMet_MTases 219 312 - -
Dod08g0903 379 PIRSF O-mtase 15 379 IPR016461 GO:0008168
Dod08g0903 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 379 IPR016461 GO:0008168
Dod08g0903 379 SUPERFAMILY "Winged helix" DNA-binding domain 28 135 IPR036390 -
Dod08g0903 379 PANTHER O-METHYLTRANSFERASE 17 379 IPR016461 GO:0008168
Dod08g0903 379 Pfam Dimerisation domain 48 99 IPR012967 GO:0046983
Dod08g0903 379 Gene3D - 17 132 IPR036388 -
Dod08g0903 379 Gene3D Vaccinia Virus protein VP39 133 379 IPR029063 -
Dod08g0903 379 Pfam O-methyltransferase domain 158 361 IPR001077 GO:0008171
Dod08g0903 379 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 17 379 - -
Dod08g0903 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 376 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0903 Dod-Chr8 11043174 11050390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0903 16 379 Monolignol Biosynthesis Gene Families AT5G54160 50.411 6.53e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0903 K13066 - gmx:100789402 481.485