Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0894 ATGCCATCTTCGGTTCTATCCAGTGATAGTATGCATATTGGGCTTCTTGCAGCTGCTGCCCATGCTGCAGCAACTAATAGCTGTTTCACAGTGTTCTATAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCACTTTCAAAATATACCAAAGCTGTCTACCACACACGAGTGTCTGTTGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACAATAACTGGAATAACTGACCTGGATCCTGTTCGTTGGCCGAATTCTCATTGGCGATCTGTCAAGGTCGGTTGGGATGAATCCACAACAGGAGAGAGGCAGCCACGAGTATCATTATGGGAAATTGAGCCTTTAACAACATTCCCGATGTACCCATCACTATTTCCCCTGAGATTGAAGCGTCCATGGCATCCTGGCACCTCATCTTTTCTCGATGGAAGAGATGAGGCAGCTAATGGGCTGATGTGGCTGAGAGGTGGACATGGAGACCAAGGTCTCAATTCCCTCAATTTTCAAGGTGTTGGTATACTGCCCTGGATGCAGCAGAGACTGGATCCAACTTTACTTGGAAATGATCATAATCAGCAGTACCAAACCATGTTGGCAGCTGGTTTGCATAACCTAGGGAGTGGAGATCTTTTGAGGCAACAAATGATGAATTTCCAACAGCCATTCAATTATCTTCAACAATCAGGAAACCCCTCTACTACTATGCAGCTTCAGCAGCAGCAAACAATTCAGCAATCAGTGTCTTCTAATATACTGCAGCCACAAACCCAAGTATTGGCAGAGAACCTGTCTCAGCAACTCCTTCAGAAATCGCATAACAATCGAGAAGACCAAGCACAGCAGCAGCAGCAACACACTTATCAAGATGCACTTTTAATTCAAAGTGACCAGCTCCACCAGAGGCAACACTCTAGTTTGCCTTCACCATCATATTCGAAACCAGAGTTCTTAGATTCAAGCATGAACTTCTCTGCTTCGGGCTCGCCTAGACAGAACATGCTTAGCTCCCTTTGTCCTGAAGGGAACAGCAGTCTCTTGAACTTATCCAGGAGTGGTCAGTTGATGCTGACAGAACAGTTACCCCAACAATCATGGCCCTCGAAGCATACACCTTTGCAGGTCAATGCTTTTGGCAACTCAATGTCACATGTGCAATATTCTGGAAAAGATACTGCGGTGGTGCCACCACATTGTAATTCAGATAACCAGAATCCAACTCTCTTTGGTGTTAATATTGATTCATCTGGCCTTCTGCTCCCCACCACTGTCCCTCATTATCCCACTTCATCAGCTGATACCAACGCTTCAACAATTCCATTAGGGGAGTCTGGATTCCAGGGTCCCCTGTATGCTTGCATTCAAGATTCATCTAAGTTGTTGCAAAGTTCTGGGCAAGTTGACCCACAAAACCAGACACAAACATTTGTCAAGGTTTACAAATCAGGGTCAGTTGGGCGCTCACTCGACATCTCCCGGTTCAGCAGCTATCATGAACTGCGAGAGGAGTTGGCTCAGATGTTTGGAATCGAGGGGAAGTTAGGAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGATGATCCGTGGGAATCATTCGTCAATAATGTTTGGTATATCAAAATACTCTCTCCTGAAGATATTCAGAAGATGGGAGATCAAGCCGTTGAAGCCCTTGGTCCAAGTTCAGGACAAAGGCTGAATAGCACTGGTGCAGAATCTCATGACACTGTTTCTGGGCTACCATCAATAGGCTCACTTGAATACTGA 1830 0.4568 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYTKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGITDLDPVRWPNSHWRSVKVGWDESTTGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDEAANGLMWLRGGHGDQGLNSLNFQGVGILPWMQQRLDPTLLGNDHNQQYQTMLAAGLHNLGSGDLLRQQMMNFQQPFNYLQQSGNPSTTMQLQQQQTIQQSVSSNILQPQTQVLAENLSQQLLQKSHNNREDQAQQQQQHTYQDALLIQSDQLHQRQHSSLPSPSYSKPEFLDSSMNFSASGSPRQNMLSSLCPEGNSSLLNLSRSGQLMLTEQLPQQSWPSKHTPLQVNAFGNSMSHVQYSGKDTAVVPPHCNSDNQNPTLFGVNIDSSGLLLPTTVPHYPTSSADTNASTIPLGESGFQGPLYACIQDSSKLLQSSGQVDPQNQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLGDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGDQAVEALGPSSGQRLNSTGAESHDTVSGLPSIGSLEY* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0894 609 PANTHER AUXIN RESPONSE FACTOR 1 594 - -
Dod08g0894 609 Gene3D - 479 572 - -
Dod08g0894 609 SUPERFAMILY CAD & PB1 domains 475 557 - -
Dod08g0894 609 ProSiteProfiles PB1 domain profile. 483 567 IPR000270 GO:0005515
Dod08g0894 609 MobiDBLite consensus disorder prediction 307 348 - -
Dod08g0894 609 MobiDBLite consensus disorder prediction 579 609 - -
Dod08g0894 609 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Dod08g0894 609 Pfam AUX/IAA family 478 567 IPR033389 -
Dod08g0894 609 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 594 IPR044835 GO:0003677|GO:0006355|GO:0009725
Dod08g0894 609 MobiDBLite consensus disorder prediction 581 601 - -
Dod08g0894 609 Gene3D - 57 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0894 Dod-Chr8 10911872 10916264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0894 1 575 B3 DNA Binding Superfamily AT5G37020 62.671 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0894 - - gmx:100780393 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0341 05 4395529 4400705 Dod08g0894 08 10911872 10916264 PCT