Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0882 ATGGACGAGGAGGAGCAACGAAGCCTCGAGAGCTTCTTAAGATGGGCAGCACAGCTTGGAATATCAGACTCAACAACCACTGACAAACCACCTCAACACTCCCATTCCTGTTTGGGTTCTTCTCTCTTTGTCTCTCACTTTCCTCACACTGGAGGTAGAGGTTTGGGTGCTGTGAGAGATCTTAGGAGGGGAGAACTGATTCTCACAGTTCCAAAATCTGCTTTGATGACAAGTGAGAGTGTTATGGAAGATAAAAAGCTCTGTGTTGCTGTCAATAGGCATTCTTCTCTTTCCTCAACCCAGATATTGATTGTTTGCTTGTTGTATGAAGTGGGTAAAGGAAAAGCTTCAAGGTGGCATCCATACCTCATACATTTGCCGCACAGTTACGATATCCTAGCCATGTTTGGTGAACTCGAGAAAAATGCTCTGCAAGTGGATGAGGCTATATGGATCACGGAGAAAGCTGTGCTGAAAACTAAATCAGAGTGGAAAGAAGCTCGTGCTTTGATGGAAGAACTCATGCTTAAGCCCCAGCTTTTAACATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCTCGGACATTGCATATACCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTCAATTATGATGCGCCTGGAGAGGAGCCATCTGCTACTGGGGATGTAGAGAATTTGCTATCTAACTCTTCCATCCATGTTAGTTCCTCATATGGAGACAGTACTATAATGGTAGGTGCAGATCAGCTTGATTCTCAGTCTTTGAGATTAACTGATGGTGGGTTTGAGGAAGATGTTAATGCATATTGCTTTTATGCCCGGGCACATTACAAGAAAGGAGATCAGGTTATGTTATGCTATGGGGCTTACACAAATTTGGAGCTTCTTGAACATTATGGCTTTCTCGTGCATGACAATACAAATGACAAATTTTTTATCCCTTTGGAACCTAGCATATATTCTTCCACTTCTTGGTCCAAGGAATCACTATACATCCATCACGATGGGAAGCCTTCCTTTGCACTACTAGCTGCCCTACGGTTGTGGGCAACCCCTCAGATTAAGAGGAGGTCCGTTGCACATCTTGCTTATTCGGGTTGCCAAATCTCCATAGACAATGAAACTTTCATTATGAAATGGCTATCAAAAACTAGTCATACTGTCTTGAAGAATTTGCCAACATCTATTGATGAAGACACCTTGCTTCTGAATGCAATGGATAATAGTCAAGATTTTTGTACTTTCATGGAGATAACTACACTTATGTCATGCAGGGATGAGGTTGATACTTTCTTAGAAGCTTATAACATGAAGGATACATGTAGTTTTTCAAATATGATTTTGTCCAGAAAAGCAAGAAGGGCCATGGACAGGTGGAAATTGGCCGTCCAATGGAGAATAAAGTATAAGAAAGTCCTTGTTGATTGTATCACTTATTGCAATCAAATACTGGATTCTTTCATGAAATAA 1491 0.4178 MDEEEQRSLESFLRWAAQLGISDSTTTDKPPQHSHSCLGSSLFVSHFPHTGGRGLGAVRDLRRGELILTVPKSALMTSESVMEDKKLCVAVNRHSSLSSTQILIVCLLYEVGKGKASRWHPYLIHLPHSYDILAMFGELEKNALQVDEAIWITEKAVLKTKSEWKEARALMEELMLKPQLLTFKAWVWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEPSATGDVENLLSNSSIHVSSSYGDSTIMVGADQLDSQSLRLTDGGFEEDVNAYCFYARAHYKKGDQVMLCYGAYTNLELLEHYGFLVHDNTNDKFFIPLEPSIYSSTSWSKESLYIHHDGKPSFALLAALRLWATPQIKRRSVAHLAYSGCQISIDNETFIMKWLSKTSHTVLKNLPTSIDEDTLLLNAMDNSQDFCTFMEITTLMSCRDEVDTFLEAYNMKDTCSFSNMILSRKARRAMDRWKLAVQWRIKYKKVLVDCITYCNQILDSFMK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0882 496 SUPERFAMILY SET domain 8 313 IPR046341 -
Dod08g0882 496 PANTHER PROTEIN SET DOMAIN GROUP 40 5 481 - -
Dod08g0882 496 Pfam Rubisco LSMT substrate-binding 343 480 IPR015353 -
Dod08g0882 496 Gene3D set domain protein methyltransferase, domain 1 5 309 - -
Dod08g0882 496 Gene3D - 325 495 IPR036464 -
Dod08g0882 496 CDD SET_LSMT 41 309 - -
Dod08g0882 496 Pfam SET domain 52 295 IPR001214 GO:0005515
Dod08g0882 496 ProSiteProfiles SET domain profile. 38 295 IPR001214 GO:0005515
Dod08g0882 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0882 Dod-Chr8 10692528 10697075 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod08g0882 SET 9.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0882 - - gmx:100787452 799.275