Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0879 ATGGCAGTTTCATTGCCCCCAGGTTTCAGGTTCCACCCCACCGACGAAGAACTTGTTGCTTACTACCTCAAAAGGAAGATCAATGGGCGTCAGATTGAGTTGGAAATCATCGCTGAAGTTGATCTCTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCTTTGTTACCAGGAAACGATTTGGAGTGGTATTTCTTTAGTCCACGTGATAGAAAGTACCCAAATGGATCAAGAACCAATCGTGCAACCAAATCTGGGTATTGGAAGGCCACAGGAAAGGATCGGAAAGTGAACTCCCAATCTCGTTCAGTTGGTACGAAGAAAACTCTAGTTTATTATCGTGGAAGGGCACCCCATGGCTGTCGGTCAGATTGGATTATGCATGAATATCGTCTTGATGAAAGAGAATGTGAAACCCCCTCAGGCTTGCAGGATGCATATGCACTTTGTCGTGTGTTCAAAAGGAGTGCAGTGATTGCCCCAAAAGTTGGGGAACGCTACGTTACCAGCCATGCATTACCAATTACAAGCGATCAATCATCCAGCATTGAGCTATACTCTGAAGGAAGGGGCGAAGATTTAGATAGCTCAAATTATTTGGTGCCGATGGAAACTTGCTCACCCATCAACATGGTAAATGACACTTCTCTCAATGTCAATGATGGGACAAGGGATCATGGGAAATGGTCACAACACTACTTATCAGAAGACCCATTATTCAGCCTTCCAACTTCTTCATTTTCTAATTATGGAGCCATTACATACCCTCCATCCAAGGTTGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTGCCATGCCTCCATTGGAGGTAGAGGACTTCCCTCATGTTGCAACCTCTGAGCTGAAGATGACACAAGCCTCCGGTGCCATGCAAGGAATTAGCAGAAATGAAACTGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCTCAGGAACTGATAAATCAGTCTAGCTACTCATCATCACAGGCATGGGGTGGCAATCATGAAAATTGTGCACCGCGTGAAGATGATTTCACTTTCATGGTTGGCACTAACTACAACAACAATTCAAATGATATGAGCTCCATGAGATATGTTGACAGAACGTGGGAGGATCCAAACACTAGATCCATAGAGATCGGAGATCTGGGTGAAGAATTCAAGGGAGAGAGGATGGTAGAAAATTTAAGATGGGTTGGCATGTCAAGAAAAGATTTGGAAAAGAGCTCTACGGAAGAACAAAAGATTGTTCCAATGGAGGATATTTCAAGCTTCCAAACAAATAGAGAAGAAAATGAGGTGCAAGCAGAATCTGAGCAACACAATAGCAACAAGGAACTCAATGACACTGACATCAACGATTTCTCATTGGGCTTCATCAATGATGATGACCCTAGCAATGAGAACTTCATAGAAGATGGTAACATGGATGATTACTCGAGTTCTCCAAGCTTTGAGGTCGTTGAGGAAATAAGGGTCAGTCATGGAATGTTTGTTTCAACTCGTCAAGTAGCCGAGACATTCTTCCACCAAATAGTTCCTTCACAAACCGTTCAAGTTCACCTCAATCCAGTGATATCAAGCAATCATCATTGTTCTATAGAGAATGCAGAGACACTAATGATGATACTAGAGAATCAAGGGTCTAATTTCCTTATTAAGTTTAAGGCCTATGTGATGGGGAAGCTAATAATGAAGCCATCAAAGACAATAGCAAGTGCCATTGTGTTCATCTTTGCACTTCTATTGATGCATTGTGCTTATTTGAAGGAAGAAGTGGGAATTTGGAACAAATGGCACTGCAGTGATACCAGCATGAAGATAATGAGACAATCATCTAAGATAATCAGTTGGAATCGTGAGTCAGAAAAGGCTTGGTTTGTTGGTGTCAAAAGTGAGAAAGGGTTTAGTGCAGTCTTGAAGAAAATGGGCATTTTCCTCACCATATCTTTGGCACTTTGTACCATGTGGGCTAACCACGTTATAGTTAACCCTTGA 2013 0.4228 MAVSLPPGFRFHPTDEELVAYYLKRKINGRQIELEIIAEVDLYKCEPWDLPGKSLLPGNDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRSVGTKKTLVYYRGRAPHGCRSDWIMHEYRLDERECETPSGLQDAYALCRVFKRSAVIAPKVGERYVTSHALPITSDQSSSIELYSEGRGEDLDSSNYLVPMETCSPINMVNDTSLNVNDGTRDHGKWSQHYLSEDPLFSLPTSSFSNYGAITYPPSKVDIALECARMQHRFAMPPLEVEDFPHVATSELKMTQASGAMQGISRNETDILQEILSVAHASQELINQSSYSSSQAWGGNHENCAPREDDFTFMVGTNYNNNSNDMSSMRYVDRTWEDPNTRSIEIGDLGEEFKGERMVENLRWVGMSRKDLEKSSTEEQKIVPMEDISSFQTNREENEVQAESEQHNSNKELNDTDINDFSLGFINDDDPSNENFIEDGNMDDYSSSPSFEVVEEIRVSHGMFVSTRQVAETFFHQIVPSQTVQVHLNPVISSNHHCSIENAETLMMILENQGSNFLIKFKAYVMGKLIMKPSKTIASAIVFIFALLLMHCAYLKEEVGIWNKWHCSDTSMKIMRQSSKIISWNRESEKAWFVGVKSEKGFSAVLKKMGIFLTISLALCTMWANHVIVNP* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0879 670 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Dod08g0879 670 MobiDBLite consensus disorder prediction 437 453 - -
Dod08g0879 670 MobiDBLite consensus disorder prediction 427 453 - -
Dod08g0879 670 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 2 397 - -
Dod08g0879 670 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Dod08g0879 670 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Dod08g0879 670 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 2 397 - -
Dod08g0879 670 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0879 Dod-Chr8 10667880 10673219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0879 3 661 NAC Transcription Factor Family AT1G65910 44.444 9.31e-167 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod08g0879 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0879 - - gmx:100809019 983.4