Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0870 ATGGTTCTCTCCAAAACCGCCTCCCAAACCGATGTCTCCGTCCACTCAACCTTTGCCTCACGCTATGTCCGCGCCTCCCTTCCCAGGTTTAAGATGCCGGAAGAGTCGATCCCTGGTGAAGCGGCATACCAGATCATAAGCGATGAGTTGATGCTTGACGGAAACCCTAGGCTGAATCTTGCATCGTTCGTGACAACATGGATGGAGCCTGAGTGTGACAAGCTCATCATGGCTGCCATTAACAAGAACTTCGTCGACATGGACGAGTACCCTGTCACCACTGAGCTCCAGAATCGGTGTGTTAACATGGTAGCTCATCTTTTCAATGCACCCCTTGGAGAGTCAGAAGCTGCAGTTGGTGTTGGCACGGTTGGCTCATCGGAGGCCATAATGTTGGCTGGATTGGCTTTCAAAAGGAAGTGGCAGAACAAAAGGAAACAAGAAGGGAAGCCTTATGACAAACCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAGGTGGAACTGAAAGAGGTGAAGTTGAGTGATGGATACTATGTAATGGACCCTGAAAAGGCCATGGAGATGGTGGATGAGAATACAATTTGTGTTGCTGCCATCCTTGGTTCCACACTAAATGGAGAATTTGAAGATGTCAAGCGCTTAAATGATCTTCTAATTGAAAAGAATAAGGAAACAGGATGGGACACTCCAATTCATGTGGATGCAGCTAGTGGTGGATTCATAGCGCCATTTATTTATCCAGAGCTTGAGTGGGACTTCAAGTTACCATTAGTGAAGAGCATAAATGTTAGTGGCCACAAGTATGGTCTAGTCTATGCTGGCATTGGTTGGGTCATCTGGAGAAGCAAGGAGGACCTTCCTGAGGAACTCATCTTCCATATCAACTATCTTGGAACTGATCAACCCACCTTTACCCTCAACTTTTCCAAAGGTTCTAGCCAAATCATTGCTCAATATTATCAACTAATTCGTTTGGGTTATGAGGGATATAGAAATGTCATGAAAAATTGCAGAGATAACATGATAGTGCTAAAGGAAGGACTCAAGAAAATAGGTCGCTTTAACATCGTATCCAAAGATGATGGTGTGCCCTTGGTGGCCTTCACATTGAAGGACCATAACCATTTTGACGAGTTCCAAATTTCCAACAGGCTGAAGCGATTTGGTTGGATAGTGCCAGCATACACCATGCCCCCAAATGCACAACACGTGACCGTGCTTCGTGTCGTCATCAGGGAAGACTTCTCACGCACCTTTGCCGAGCGCCTTGTCCTTGATGTCCAGAAAGTGGTTCACGAGCTTGATTTGCTCCCTGCTAAGGTGGTGAGCAACACCACTATAATGGTTACCGGAGAAGAAGGTGTGACAAATAATAGCAAGGTGCTGGTTGCTAAGAAGAGTGCTTTGGAGACACAGAGGGAAATCACTGCTACTTGGAAGAAATTTGTGGTGGAGAAGAAGAGGATGAATGAGAAGAAATGGTGTTTACTAGAGCCTTAA 1530 0.4582 MVLSKTASQTDVSVHSTFASRYVRASLPRFKMPEESIPGEAAYQIISDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNFVDMDEYPVTTELQNRCVNMVAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKQEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVMDPEKAMEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFKLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGYEGYRNVMKNCRDNMIVLKEGLKKIGRFNIVSKDDGVPLVAFTLKDHNHFDEFQISNRLKRFGWIVPAYTMPPNAQHVTVLRVVIREDFSRTFAERLVLDVQKVVHELDLLPAKVVSNTTIMVTGEEGVTNNSKVLVAKKSALETQREITATWKKFVVEKKRMNEKKWCLLEP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0870 509 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dod08g0870 509 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod08g0870 509 Gene3D - 1 65 - -
Dod08g0870 509 Gene3D - 361 448 - -
Dod08g0870 509 PANTHER GLUTAMATE DECARBOXYLASE 1 500 - -
Dod08g0870 509 PANTHER GLUTAMATE DECARBOXYLASE 1 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod08g0870 509 Gene3D - 66 360 IPR015421 GO:0003824
Dod08g0870 509 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0870 Dod-Chr8 10572618 10577379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0870 1 498 Calmodulin-binding Proteins AT5G17330 81.800 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0870 K01580 - gmx:100796533 909.827