Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0869 ATGGTTCTCTCCAAAACCGCCTCCCAGACCGATGTCTCCGTCCACTCAACCTTTGCCTCACGCTATGTCCGCGTCTCCCTTCCCAGATTTAAGATGCCGGAAGAATCGATCCCTAAGGAAGCGGCATACCAGATCATAAACGATGAGTTAATGCTTGATGGAAACCCTAGGCTGAATCTTGCATCGTTCGTGACAACGTGGATGGAGCCTGAGTGTGACAAGCTCATGATGGCTGCCATTAACAAGAACTACGTCGACATGGACGAGTACCCTGTCACCACTGAGCTCCAGAATCGGTGTGTTAACATGATAGCTCATCTTTTCCATGCACCCCTTGGAGAGTCAGAAGCTGCAGTTGGTGTTGGCACGGTTGGCTCATCGGAGGCCATCATGTTGGCTGGATTGGCTTTCAAAAGGAAGTGGCAGAACAAGAGAAAACAAGAAGGGAAGCCTTATGACAAACCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAGGTGGAACTGAAAGAAGTGAAATTGAGTGATGGATACTATGTAATGGACCCTGAAAAGGCTGTGGAGATGGTGGATGAGAACACAATTTGTGTTGCTGCCATCCTTGGTTCCACATTAAATGGAGAATTTGAAGATGTCAAGCACTTAAATGATCTTCTAGTTGAAAAGAATAAGGAAACTGGATGGGACACTCCAATTCATGTGGACGCAGCTAGTGGTGGATTCATAGCACCATTTATTTATCCAGAGCTTGAGTGGGACTTTAGGTTACCATTAGTGAAGAGCATCAATGTTAGTGGGCACAAGTATGGTCTAGTCTATGCTGGAATTGGTTGGGTCATTTGGAGAAGCAAGGAAGACCTTCCCGAGGAACTCATCTTCCATATCAACTATCTTGGAGCTGATCAACCTACCTTTACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAGTATTACCAACTAATTCGTTTGGGTTATGAGGGATATAGAAATGTCATGGAAAATTGTAGAGATAACATGATGGTACTTAAGGAAGGACTTGAGAAGACGGGTCGCTTCAACATTGTATCCAAAGACGATGGTGTGCCATTAGTGGCCTTCACATTGAAAGACCGCAACCACTTTGATGAGTTCCAAATCTCTGACATGCTAAGGCGCTTTGGTTGGATAGTGCCAGCATACACCATGCCACCAGATGCACAACACGTGACCGTGCTCCGTGTCGTCATCAGGGAAGACTTCTCACGCACCCTTGCTGAGCGCCTTGTCATTGATGTCCAAAAAGTGGTCTTGGAGCTTGATTTGCTCCCTGCTAAGGTGGTGAGTAGCACTACCATAACTGTTACTGGAGAAGGTGTGAAGGATAATGGCAAAGTGATGGTTCCTAAGAAGAGTGCTTTGGAGACACAGAGGGAGATCACTACTGTTTGGAAGAAGTTTGTGATGGAGAGGAAGATGATGAATGACAAGATGAATGGTGTTTGCTAG 1521 0.4589 MVLSKTASQTDVSVHSTFASRYVRVSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFHAPLGESEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKQEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKHLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMMVLKEGLEKTGRFNIVSKDDGVPLVAFTLKDRNHFDEFQISDMLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVIDVQKVVLELDLLPAKVVSSTTITVTGEGVKDNGKVMVPKKSALETQREITTVWKKFVMERKMMNDKMNGVC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0869 506 Gene3D - 66 360 IPR015421 GO:0003824
Dod08g0869 506 SUPERFAMILY PLP-dependent transferases 15 441 IPR015424 -
Dod08g0869 506 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod08g0869 506 CDD DOPA_deC_like 59 439 - -
Dod08g0869 506 PANTHER GLUTAMATE DECARBOXYLASE 1 506 IPR010107 GO:0004351|GO:0006536|GO:0030170
Dod08g0869 506 Gene3D - 361 448 - -
Dod08g0869 506 PANTHER GLUTAMATE DECARBOXYLASE 1 506 - -
Dod08g0869 506 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dod08g0869 506 Gene3D - 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0869 Dod-Chr8 10557758 10565143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0869 1 506 Calmodulin-binding Proteins AT5G17330 84.221 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0869 K01580 - gmx:100796533 937.562