Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0863 ATGCCCTTGGAGGGGATTTTCATTGATACAACCTCAACAAATGCTCCGGATCTTTCCCTTCAAATAAGCCCCCCAAGCACTTCCTCCTCTTCTTTGATTTGCAATAAGGTCACCAATTTTGAACAACACAATTCAGCCACTAATAATTTCCCTTTTTTTTCTTCACATCAAGCCCAAATTGAGCTCTCTCTGGGAAGGAATTTCAATGTTGGAGGAGGAGGAGGACCAGCTCCAGAGGAAACAACACCACACAACAACAACAACAGCCCTTATTATCAAAGCCAAAGAACCCAGTACCATAATAACCTTCACCACCACCACCACCACCACAACAACAACAATAGTGCTACTAGTAATAGAGCTAATACTACCACTCCCTTGAATCACATAAACTATGGAGTTTCATTGCTTGATGTATCATCTGACGGCTTGAGGCCAATCAAGGGTGTCCCTGTGTATCACAACCGTTCGTTCCCTTTCATGCCATTGGATCATTCTAGGGACAAGGACACTACTCATCATCATCACCACAAGATGTGCTTATATCATCACATGCCTTCTTACCCTTCTTTGTCCTCTTCTTGTTCCTCTTTTCGCTCTAGTACTCCTTCACCTTCACCTTCACCTTCACCTTATAACTTTGCAGTACCTTCACCTGGTTTGGATCCCATGATGTCAGTGTTGAACTCTAATAATGGGCCCATGGGAGGGTGTAGGGGAGGGAGTGGCATCACAAGGTTCAATAATGGGATTTGTGGTGGTGATACCTTCAAATCTCATCATCATCCATTGCACCACCACTCATCATCACCACAATATGGGGTTGTTGGCACTTCTCATCGTGAGGCCTCTTCTCATCATGGGTTGATGAGATCCAGGTTCTTGCCTAAGCTTCCCACAAAGAGGAGCATGAGAGCACCAAGAATGCGCTGGACAAGCACCCTCCATGCTCGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGGACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGCCATTCAGATGGATCTGGAGAGGATGACATGTTTCCAATGGGGGCCAGCGGTGACGACCGGGGAGGTCTCCGGCAACTTCCCGATCAAAGAGGACGGCCAGTGCAACATGATATGGACTACACTTCCCCCACCACAACTCTATGGAGCAACTCTTCAAGTTGTAGAGAGCCATGGCAACAAGCTACATCTAACATAGATGGTCTCAGACCACAGATCATACAGTCACAAACAGTATCAGGAGGGCATCACATTCAGGAGTGTGATTCGACCCAACTGAAGAACAGTGTTCAAGATTCTAATTTGGATTGCAAGAACCCAAGCTTGGAGTTCACATTAGGAAGACCAGATTGGAATGGCAAAGAACAAGCCTGA 1488 0.4597 MPLEGIFIDTTSTNAPDLSLQISPPSTSSSSLICNKVTNFEQHNSATNNFPFFSSHQAQIELSLGRNFNVGGGGGPAPEETTPHNNNNSPYYQSQRTQYHNNLHHHHHHHNNNNSATSNRANTTTPLNHINYGVSLLDVSSDGLRPIKGVPVYHNRSFPFMPLDHSRDKDTTHHHHHKMCLYHHMPSYPSLSSSCSSFRSSTPSPSPSPSPYNFAVPSPGLDPMMSVLNSNNGPMGGCRGGSGITRFNNGICGGDTFKSHHHPLHHHSSSPQYGVVGTSHREASSHHGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGHSDGSGEDDMFPMGASGDDRGGLRQLPDQRGRPVQHDMDYTSPTTTLWSNSSSCREPWQQATSNIDGLRPQIIQSQTVSGGHHIQECDSTQLKNSVQDSNLDCKNPSLEFTLGRPDWNGKEQA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0863 495 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 495 - -
Dod08g0863 495 SUPERFAMILY Homeodomain-like 304 360 IPR009057 -
Dod08g0863 495 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 307 360 IPR006447 GO:0003677
Dod08g0863 495 MobiDBLite consensus disorder prediction 410 427 - -
Dod08g0863 495 MobiDBLite consensus disorder prediction 104 123 - -
Dod08g0863 495 MobiDBLite consensus disorder prediction 362 427 - -
Dod08g0863 495 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 495 IPR044847 GO:0000976|GO:0006355|GO:0010158
Dod08g0863 495 MobiDBLite consensus disorder prediction 70 93 - -
Dod08g0863 495 Gene3D - 306 363 - -
Dod08g0863 495 MobiDBLite consensus disorder prediction 466 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0863 Dod-Chr8 10427397 10434316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0863 145 492 G2-like Transcription Factor Family AT5G16560 45.628 4.94e-72 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod08g0863 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0863 - - gmx:100813413 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0193 04 2400695 2407816 Dod08g0863 08 10427397 10434316 PCT