Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0860 ATGTCAGTACAGAGAGCCCTCGCACAACACAATACTCTATGTCATGATAGCCAGCCACCCCGGGCTTTCAGATACGTGGTCCCCACTTGCATGTGCGCCCTTCCCTTCCCTTCCCTTCCCTTCTCCCCCCATTCTCCTTCACCCCCATCCTCACCTCAATGCACCCCTTCTTCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTGAAACAACACAACACTAGTGCAAGTTTGAAACAAAACACCACCATGAAGCACAAGAACAAGAACAAGCTCCACCGCCACCTTCTCTTCATCATCTTCCTCCTCTTCCTCTCCCTCACCCTCTCCCAACAAGACTCCTCCCCCGACACCCCACCAATGCTGTCCCTCAAGAACAGCCTCAGCCCCTCCGAAACCCTCGGCTGGTCCGACCCAAACCCCTGCAAATGGCGCCGCGTCTCATGCTCCGAGTCCAACCGCGTCACCCGCATCCAAATCGGCCGCATGTCCCTCACCGGGACCCTCCCGCCTTCCCTCAACAACCTCACCGAGCTCCAGGTGCTGGAGCTTCAATACAACAACCTCTCAGGTTCCATCCCAAGCTTACCCTCCCTAACTTCCCTCCAAGCCCTCGTCCTCAGCGGTAACCGCTTCTCCGCTATCCCCGCCGACTTCTTCGCCACCATGTCCCAGCTCCAGGTTGTCGAGATCGACGACAACCCTTTTGACAGCTGGCAGCTACCTCAGTCTCTCGGAAACTGTTCCTCACTTCAGAACTTCTCTGCTAATAGTGCTAACATAAAGGGTCAAATACCTGATTTTTTTGGTTCTGAGGTTTTTCCTGGTTTGACCCATTTGCATTTGGCTTTCAATGAGCTTGAAGGACGGTTGCCCCTGAGTTTTTCTGGCTCGCAGATTCAGTCTCTGTGGCTGAATGGGCAAAAGGGTGATTCTAAGCTTGGTGGGGGTGTTGGTGTTTTGCAGAATATGACTTCTTTGACTGAGGTTTGGTTGCAGTCCAATGGGTTCACTGGTCCTTTGCCTGATTTTTCAGAGTTGAAGGGGTTGAAAGTTTTGAACTTGAGGGATAATTCTCTAACTGGTCCTGTTCCTGGTTCTTTGGTTGGGCTAGAGGGATTGAAAGTTGTGAACTTGACTAATAACTTTCTTCAGGGTCCAATGCCGAAGTTTGGTGATGGCATTGGGGTTGATATGGTGAAGAGTTCCAATAGTTTTTGTTTGGATGTTCCTGGGGATTGTGATCCCAGGGTGAAGGTTTTGCTTTCTGTTGTTGAGCCTTTTGGGTACCCTCACAGGTTTGCTGAGAGTTGGAAAGGGAATGACCCTTGCGCTAATTGGATTGGTATCACTTGCAGTGATGGGAACATCAGTGTTGTTAATTTTGAGAAGATGGGGCTTAGTGGTGTTATATCCAAGGATTTTGCATCTATTAAGTCACTGCAAAAGTTGGTTCTTGCTGAAAATAATATCACTGGTTCAATCCCAGTGGAGCTCACCAGTTTGCCTGCTTTGACTCTGTTGAATGTTGCAAACAATCAGCTTTTTGGGAAGGTTCCAAGTTTTAGGAGCAATGTGATTGTAAACGCACGTGGTAACAAGGATATAGGGAAGGATAAGAGCAGTGTGGCCCCTCCGGGTCCATTATCTCCATCAGGTCCTAATGCAAATGCAGGAGAGAATGATGGGGGTTCTGGGAATGGTGGCAAGAAGTCTAAGTCTTCTCATGTGGGAATGATTGTGTTTGCTGTGGTTGGTGCTGTGTTTGTGGTTTCCTTGATTGGTTTGTTAGTTTTCTGCTTTTTAAGGATGAAGCAGAAGAGGTTGAGTAGGGTCCAGAGTCCTAATGCACTGGTTATTCACCCTCGCCATTCTGGATCAGATAATGAGAGTGTGAAGATCACTGTTGCAGGTTCAAGTGTCAGTGTTGGTGGTGTTAGTGAGACACAAACCGTGCCAAGCAGTGATGCAGGTGATATCCAAATGGTTGAGGCAGGAAACATGGTAATTTCCATACAAGTTTTGAGGAATGTTACTAGCAATTTCAGTGAGAAGAACATATTGGGACAAGGAGGTTTTGGAACAGTTTACAAAGGTGAGCTTCATGATGGTACAAGAATTGCAGTGAAGAGGATGGAGTCTGGGGCAATAACTGGCAAGGGTGCAACAGAATTCAAGTCTGAGATTGCTGTTTTGACGAAGGTTCGCCACAGGCACCTTGTGGCTCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTATATGAATACATGCCTCAGGGGACACTGAGTAGGCACCTTTTTAACTGGGCAGAAGAAGGGCTGAAACCATTGGAGTGGAACAGAAGATTGACCATTGCTTTGGATGTGGCAAGGGGTGTCGAGTACCTTCATGGCTTGGCCCATCAAAGCTTCATTCACAGGGACTTGAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCTGATTTTGGTCTGGTTCGTCTTGCCCCAGAAGGAAAAGCCTCAATAGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCGCCTGAATATGCAGTTACTGGCCGGGTGACAACTAAAGTCGATGTGTTCAGCTTTGGTGTAATACTGATGGAACTAATAACTGGAAGAAGAGCACTTGATGAGACTCAACCTGAGGATAGCATGCACCTAGTAACATGGTTCCGCAGAATGTACATAAACAAGGACTCATTCCGCAAGGCCATTGACCCCACAATTGAGCTAAACGAGGAGACACTTGCTAGCATTCACACTGTTGCAGAATTAGCTGGCCACTGCTGTGCAAGGGAGCCATATCAAAGGCCTGACATGGGTCATCCTGTTAATGTGCTCTCTTCCCTTGTGGAAATGTGGAAGCCTTCTGATCAGTGTTCTGAGGACATGTATGGAATTGACCTTGACATGTCTTTGCCACAAGCACTTAAGAAGTGGCAGGCTTATGAAGGTGGAAGCAACATGGAGTCTTCTTCTTCTTCTTCACTTCTTCCAAGCTTAGATAATACACAGACTAGTATCCCTACACGCCCTTATGGTTTTGCTGATTCATTCACATCAGCTGATGGTAGGTGA 3108 0.4749 MSVQRALAQHNTLCHDSQPPRAFRYVVPTCMCALPFPSLPFSPHSPSPPSSPQCTPSSILSLSLSLSLKQHNTSASLKQNTTMKHKNKNKLHRHLLFIIFLLFLSLTLSQQDSSPDTPPMLSLKNSLSPSETLGWSDPNPCKWRRVSCSESNRVTRIQIGRMSLTGTLPPSLNNLTELQVLELQYNNLSGSIPSLPSLTSLQALVLSGNRFSAIPADFFATMSQLQVVEIDDNPFDSWQLPQSLGNCSSLQNFSANSANIKGQIPDFFGSEVFPGLTHLHLAFNELEGRLPLSFSGSQIQSLWLNGQKGDSKLGGGVGVLQNMTSLTEVWLQSNGFTGPLPDFSELKGLKVLNLRDNSLTGPVPGSLVGLEGLKVVNLTNNFLQGPMPKFGDGIGVDMVKSSNSFCLDVPGDCDPRVKVLLSVVEPFGYPHRFAESWKGNDPCANWIGITCSDGNISVVNFEKMGLSGVISKDFASIKSLQKLVLAENNITGSIPVELTSLPALTLLNVANNQLFGKVPSFRSNVIVNARGNKDIGKDKSSVAPPGPLSPSGPNANAGENDGGSGNGGKKSKSSHVGMIVFAVVGAVFVVSLIGLLVFCFLRMKQKRLSRVQSPNALVIHPRHSGSDNESVKITVAGSSVSVGGVSETQTVPSSDAGDIQMVEAGNMVISIQVLRNVTSNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMESGAITGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRRALDETQPEDSMHLVTWFRRMYINKDSFRKAIDPTIELNEETLASIHTVAELAGHCCAREPYQRPDMGHPVNVLSSLVEMWKPSDQCSEDMYGIDLDMSLPQALKKWQAYEGGSNMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0860 1035 SMART serkin_6 681 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0860 1035 MobiDBLite consensus disorder prediction 114 134 - -
Dod08g0860 1035 PANTHER RECEPTOR PROTEIN KINASE TMK1 95 1035 - -
Dod08g0860 1035 Gene3D Transferase(Phosphotransferase) domain 1 759 978 - -
Dod08g0860 1035 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Dod08g0860 1035 ProSiteProfiles Protein kinase domain profile. 681 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0860 1035 SUPERFAMILY L domain-like 137 521 - -
Dod08g0860 1035 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Dod08g0860 1035 CDD STKc_IRAK 687 960 - -
Dod08g0860 1035 Pfam Protein kinase domain 682 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0860 1035 Gene3D Phosphorylase Kinase; domain 1 642 758 - -
Dod08g0860 1035 MobiDBLite consensus disorder prediction 553 569 - -
Dod08g0860 1035 SMART LRR_typ_2 198 221 IPR003591 -
Dod08g0860 1035 SMART LRR_typ_2 501 523 IPR003591 -
Dod08g0860 1035 SMART LRR_typ_2 273 296 IPR003591 -
Dod08g0860 1035 SMART LRR_typ_2 346 369 IPR003591 -
Dod08g0860 1035 MobiDBLite consensus disorder prediction 536 569 - -
Dod08g0860 1035 PANTHER OSJNBA0070M12.3 PROTEIN 95 1035 - -
Dod08g0860 1035 Pfam Leucine rich repeat 325 381 IPR001611 GO:0005515
Dod08g0860 1035 Pfam Leucine rich repeat N-terminal domain 418 452 IPR013210 -
Dod08g0860 1035 Pfam Leucine rich repeat N-terminal domain 120 149 IPR013210 -
Dod08g0860 1035 MobiDBLite consensus disorder prediction 999 1035 - -
Dod08g0860 1035 SUPERFAMILY Protein kinase-like (PK-like) 658 965 IPR011009 -
Dod08g0860 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Dod08g0860 1035 Gene3D Ribonuclease Inhibitor 415 539 IPR032675 -
Dod08g0860 1035 Gene3D Ribonuclease Inhibitor 115 413 IPR032675 -
Dod08g0860 1035 MobiDBLite consensus disorder prediction 999 1024 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0860 Dod-Chr8 10390457 10394614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0860 163 963 Receptor kinase-like Gene Family AT5G07280 31.076 6.08e-83 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dod08g0860 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0860 K00924 - aprc:113846741 1479.54