Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0859 ATGCAGCTACTCACCACTAAGAATAAAGCTGAAGTTATTGATGAAATTTTCAAACTGTTACAAAGGTTGAAGCAACTGTTCCAGGGGAATTCTGATGAATCCCTTCTGCATTTTGATGTTGGGCAAGGGAGTCTGGTTTGTGATTCTGGTTCATCTGCGTTTGATGACAATGGTGACAGCGATATTGGTGGTGGTGAAACTGAAAAGGTTTCTTCCAGTATTGTTGACGAGTCCAATATTCATAATGGGTCGCTGAAGGGGTCGTTTAGGAGAACCATTACCTCGTGGCAAAAGGATGAGATTTTAGGCAGAGGGTCATATGGGACCGTGTATGAAGGATTTACCAGTGATGGATTCTTTTTTGCGGTGAAGGAAGTCTGTCTGAAGGATGAAGGAAGCCAGGCCAAACAATGCATTTTACAACTTCAGCAGGAAATTTCTCTTTTAAGTCAGCTTGAACATTGGAACATAGTTCGATATATTGGCACGGACATGGACAATAATATGTTGTACATCTTTCTCGAGCTTGTAACGAAAGGATCATTGAGAAGGCTCTATCAAAAGTATGGTTTAAGTGGTTCTCAAGTTTCTGGTTACACAAGACAAATTTTAATTGGTTTGAAGTATCTTCATGATCGTGGTGTGATTCATAGGGACATCAAGTGTGATAATATATTGCTTGATGAAAATGGGACCATCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACCAAATTGAATGATGCCAAAACAAGCATTGGTTCGCTATGCTGGATGGCCCCTGAGGTTGCTAACCCAAGACACCGTAGTTATGGACCAGAAGCTGACATTTGGAGCTTCGGATGTACGACTTTGGAGATGTTAACACGGAAGCCTCCTTATTCTCCTTTAGGAGAAATCCAAGCGTTGCTCAGGATCGGCAAGGGTCAACCTCCTCCGATTCCTAAATCTTTATCAATAGATGCCCGAGATTTCATTCGTAAATGCTTGCAAGTTAACCCAAGTAAACGACCAACTGCTGCTCAACTATTGGATCATCCGTTTGTGAAGAGACCAAGTCTATCCCCCACAATTCCTGTTTCTCCACACAATAATCTTTTACTGTCTTAA 1110 0.4171 MQLLTTKNKAEVIDEIFKLLQRLKQLFQGNSDESLLHFDVGQGSLVCDSGSSAFDDNGDSDIGGGETEKVSSSIVDESNIHNGSLKGSFRRTITSWQKDEILGRGSYGTVYEGFTSDGFFFAVKEVCLKDEGSQAKQCILQLQQEISLLSQLEHWNIVRYIGTDMDNNMLYIFLELVTKGSLRRLYQKYGLSGSQVSGYTRQILIGLKYLHDRGVIHRDIKCDNILLDENGTIKLADFGLAKATKLNDAKTSIGSLCWMAPEVANPRHRSYGPEADIWSFGCTTLEMLTRKPPYSPLGEIQALLRIGKGQPPPIPKSLSIDARDFIRKCLQVNPSKRPTAAQLLDHPFVKRPSLSPTIPVSPHNNLLLS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0859 369 PANTHER BNAA02G34600D PROTEIN 71 353 - -
Dod08g0859 369 SMART serkin_6 96 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0859 369 ProSitePatterns Protein kinases ATP-binding region signature. 102 124 IPR017441 GO:0005524
Dod08g0859 369 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 71 353 - -
Dod08g0859 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Dod08g0859 369 Gene3D Transferase(Phosphotransferase) domain 1 178 357 - -
Dod08g0859 369 ProSiteProfiles Protein kinase domain profile. 96 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0859 369 Pfam Protein kinase domain 97 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0859 369 Gene3D Phosphorylase Kinase; domain 1 74 177 - -
Dod08g0859 369 SUPERFAMILY Protein kinase-like (PK-like) 94 358 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0859 Dod-Chr8 10374261 10380208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0859 93 352 MAP Kinase Kinase Kinase AT4G08500 65.900 8.77e-117 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod08g0859 Pkinase 2.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0859 K13414 - gmx:100806902 417.927