Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0857 ATGGCTTCTTTAATTGCTTCTCAATTCAAGTATGATGTCTACCTGGGCTACAGAGGCCCAGACAGTCGCTATGGTTTTGTTAGCAACTTGCTTAAGGCACAAAGCCACAACCAAATTAAGACCTTTGTGGATACTGAGCTCAAGCCAGGAGCTGAAATATTACCCTCAGTCGCTAGAGCCATTGAAGGGTCTCACATTTTGTTGATCATATTCTCCAGAGATCACGCCTCTTCCAAGTATGCGTATGAACTTATTCAAGAAATTGTCAAACTTGTGTTAGAAAGGTTGAACCAACCGTGCCAGGGGAATTCTTATGAATCCCCGCTGCATTTTGATGGTGGTAAAACCAGTGTCGTTGACGAGTCCAATATTCATAATTTGTCGCTGAAGGGGTCTTTTAGGAGACCCATTATCTCGTGGCGAAAGGGTGAGATTTTAGGCAGAGGGTCATATGGCAGTGTCTACAAAGGATTTACCAATGATGGATTCCTTTTGGCGGTGAAGGAAGTCTGTCTGAAGGATAAAGGAAGCCAGGCCAAACAACTCATTTCCCGACTCCTGGAGGAAATGTCTGCTTTAATTCAGCTTCGACACAAGAACATAGTTCAATATATTGGCATGGACATGGACAATAATAACATGTTGTACATCTTTCTCGAGCTTGTAACACAAAGATCATTGGATAGGCTCTATCAAAAGTATAATCTAACGGATTCTCAAGTTTCTGGCTACACAAGACAGATTTTAAGTGGTCTGAAGTATCTTCATGATCAAGATGTGATTCATAGGGACATCAAGTGTGCTATATATTGCTTGATGACAATGGGACCATCAAGCTTGCAGATTTTGGTTTGGCAAAGCAAACTAAATTGA 873 0.4147 MASLIASQFKYDVYLGYRGPDSRYGFVSNLLKAQSHNQIKTFVDTELKPGAEILPSVARAIEGSHILLIIFSRDHASSKYAYELIQEIVKLVLERLNQPCQGNSYESPLHFDGGKTSVVDESNIHNLSLKGSFRRPIISWRKGEILGRGSYGSVYKGFTNDGFLLAVKEVCLKDKGSQAKQLISRLLEEMSALIQLRHKNIVQYIGMDMDNNNMLYIFLELVTQRSLDRLYQKYNLTDSQVSGYTRQILSGLKYLHDQDVIHRDIKCAIYCLMTMGPSSLQILVWQSKLN* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0857 290 ProSiteProfiles Protein kinase domain profile. 140 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0857 290 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 97 IPR035897 -
Dod08g0857 290 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 103 287 - -
Dod08g0857 290 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Dod08g0857 290 SMART till_3 10 193 IPR000157 GO:0007165
Dod08g0857 290 PANTHER BNAA02G34600D PROTEIN 103 287 - -
Dod08g0857 290 Pfam Protein kinase domain 141 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0857 290 ProSiteProfiles TIR domain profile. 9 153 IPR000157 GO:0007165
Dod08g0857 290 SUPERFAMILY Protein kinase-like (PK-like) 139 267 IPR011009 -
Dod08g0857 290 Pfam TIR domain 10 93 IPR000157 GO:0007165
Dod08g0857 290 Gene3D Transferase(Phosphotransferase) domain 1 125 274 - -
Dod08g0857 290 Gene3D - 5 101 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0857 Dod-Chr8 10345583 10349633 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0857 137 268 MAP Kinase Kinase Kinase AT4G08500 63.636 6.52e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod08g0857 Pkinase 1.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0857 - K13414 twl:120011201 189.889