Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0854 ATGGTTCTTCCATATAATGGCGCTTCTCATCAAAATGCACTCCCTTTTTCCTCAAAGGACGAGCAGGTGAACCTACGCGACATCGAAAAGCCAAGTTGGCTTGATGCTTTTCTGAGGAAAACTTTCTTTGGCCTGTGTAAAGATCATCCATATCGCAGGAATGAGTTAAATAAGTACTGTATAAACTGCGATCAGTCAGCTTGCCAGTATTGTGTGTCGTCAGGTCCTCATCATCAACACAAGGTACTCAAAGTCTATAGACATGTTTACAAAGATGTTGTCTCCCTTGGTACTATGGAAAAGTATATCGACTGCTCAGAAATTCAGCCCTACAAATGCAACAAGCGGTTGGTTATTTCTCTGAATCCTCTCCCACACTCTGGTTCAGCATCAAACAATGAGGCATCATGCAACATCTGCAGCAGAAAGTTGGCAGAACCAGATGTATACCGCTACTGCTCCATTTCTTGCAAGGTCAGAGCTGGTTCACCAGAGCCCAATGGTTCAGCTCCTCCTGCCGCTTCCGATAAGAATCAGAGTACTCCTGTCGTTTCTGATGAGAAACGCAGTTCTCCTCCGGAGATACCGGAAGGGTCATTGCGGCGAAAGAGAAGAAAGGGAATACCCCACAGAGCTCCCTTCTTCTGA 648 0.4568 MVLPYNGASHQNALPFSSKDEQVNLRDIEKPSWLDAFLRKTFFGLCKDHPYRRNELNKYCINCDQSACQYCVSSGPHHQHKVLKVYRHVYKDVVSLGTMEKYIDCSEIQPYKCNKRLVISLNPLPHSGSASNNEASCNICSRKLAEPDVYRYCSISCKVRAGSPEPNGSAPPAASDKNQSTPVVSDEKRSSPPEIPEGSLRRKRRKGIPHRAPFF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0854 215 Pfam PLATZ transcription factor 87 159 IPR006734 -
Dod08g0854 215 MobiDBLite consensus disorder prediction 162 215 - -
Dod08g0854 215 MobiDBLite consensus disorder prediction 172 187 - -
Dod08g0854 215 Pfam B-box zinc finger 45 84 IPR000315 GO:0008270
Dod08g0854 215 ProSiteProfiles Zinc finger B-box type profile. 45 85 IPR000315 GO:0008270
Dod08g0854 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 215 - -
Dod08g0854 215 SUPERFAMILY B-box zinc-binding domain 45 86 - -
Dod08g0854 215 CDD Bbox2 45 85 - -
Dod08g0854 215 Gene3D Classic Zinc Finger 41 103 - -
Dod08g0854 215 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 15 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0854 Dod-Chr8 10315736 10321001 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod08g0854 PLATZ 4.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0854 - - adu:107457969 273.478