Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0851 ATGACAACTGCGGAGGGAAAGAATAATAATACGAAGAAGAAGAAGAAGAAGGTGGTGGTGGTGGAAGAAAAGGCGGAGGAAATAGGGAATAATAAGCAGCAGCAAACGACGTCGTGTTCGAGATCTCCTTCTTGTAATTCTTCGTCTTCGTCTTCGTCTTCTTCGGACGAGAGGGAGTACGAGGTGCAGGACGTAAGGGACAGGCTGAACTCGTCGCGGGGGAGCAGGTTCAACCTGATAGAGAAAGAGTTGGGACTCAACTCGACTAGGAGGAAGTTCAGTAGCCAGGCCATCCTCCATGGCATCCGAGGCTGCTTCTCCAAAGACTTCGTCATCCACCCTGATAACAGGTGGTATCGGGCATGGACAAAATTCATATTGTTATGGGCAGTGTACTCATCCTTCTTCACCCCAATGGAGTTTGGATTCTTTCGTGGCCTGCCTGAGAATCTCTTTATACTGGACATCATAGGACAAGTAGCTTTTCTTGTGGATATTGTTTTGCAGTTCTTTATAGCTTATAGAGATAGTCAGACCTATCGCATGGTCTACAGGCGGACCCCTATTGCTCTGCGGTATCTAAAATCTAGCTTTATCTTTGATTTGCTTGGATGTATGCCTTGGGACATCATCTACAAGGTTTGTGGACGAAAAGAGGAAGTGAGGTACCTTTTGTGGATCAGATTGTATCGGGTGCGGAAAGTCACTGAGTTTTTCCATAGGTTGGAGAAGGATATACGTGTTAATTACATCATTACTCGGATTGTGAAACTCATAGTAGTTGAACTCTATTGCACCCACACAGCAGCCTGCATTTTCTACTACTTGGCTACCACACTACCTGAATCCCAAGAGGGGTACACATGGATAGGAAGTTTAAAACTGGGTGATTTTAGTTATGCACATTTCAGAGAAATCGAAATTTGGAAGCGTTACACAACCTCTTTGTATTTTGCTATAGTCACAATGGCTACTGTTGGCTACGGAGATATACATGCAGTAAACTTGAGGGAGATGATATTCATAATGATATATGTTTCATTGGACATGATTCTTGGAGCCTATTTGATTGGTAACATGACAGCTTTGATCGTCAAGGGATCAAAGACTGAAAAGTTTAGGGACAAGATGACAGATCTTATGAAATATATGAACAGAAATAGACTTGGACGGGATATCCGTGAACAAATAAAAGGCCATTTGCGCTTACAGTTTGAGAGTAGCTACACAGAGGCTGCTGTCATTCAGGACATCCCCATTTCTATTCGTTCTAAGATATCCCAAACATTATATTTGCCATACATTGAACAGGTTTCACTTTTTAAGGGCTGCTCTTCGGAATTCATCAACCAGATTGTTATTAGACTTCATGAGGAATTTTTTCTTCCAGGGGAGGTTGTAATGGAACAAGGAAATGTTGTGGATCAACTATATTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGCACAGCTGAAGATGGGTCTGAAGAAACTATTACACTTGTGCAACCTAACAGTTCATTTGGAGAGATATCTATTCTTTGCAACATTCCTCAGCCATATACTGTTCGCGTTTGTGAATTGTCTAGGCTCCTGCGGCTTGATAAACAATCGTTTACGAATATCCTAGATATATACTTTTATGATGGAAGGAAAATATTAAACAACCTTCTTGAGGGAAGAGAGTCTTTTCGGGGTAAACAATTGGAGTCAGATATCACATTTCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAACAGTGCAGCTTTTAATGGGGATCTGTATCAGCTAAAAGGTTTAATTCGAGCAGGAGCTGATCCCAACAAGACAGATTATGACGGAAGGTCACCTTTGCATCTTGCAGCATCCAGAGGATATGAAGATATCACACTTTTCCTTATTCAAGAAGGTGTAGACGTCAATATTAGAGATAATTTCGGGAACACACCCTTACTTGAAGCAGTTAGGAATGGACATGATCGAATTGCTTCTTTACTTGTTAGAGAAGGGGCATCTATGAAGATAGACAATGCTGGTAGTTTTCTGTGTACAGCTGTTGCAAGGGGAGATTCAGATTATCTTCAAAGGCTATTATCTAATGGCATGGATCCTAACTTGAAAGATTATGATTACCGAAGCCCTCTGCATGTTGCTGCAGCTGAAGGGTTATACTTCATGGCAAAGTTACTATTAGAAGCCGGAGCTAGTGTTTTTACCAAAGACAGGTGGGGAAATACCCCGCTCGATGAAGCCCGGATGTCTGGAAATAAGAACCTGATCAAACTACTAGAAGTTGCAAAATCTGTTCAGGTGTCAGAATTCCGTTGTCCCTCCCTAGAAATTTCAGATAAACTGCGCCCAAAGAAGTGCACAGTGTTCCCTTTTCACCCGTGGGATCCAAAAGAACGTAGAAGCCATGGCATCGTAATATGGGTTCCAACTTCCATTGAAGAGCTAATCAAAGCAGCATCAGAAGAGTTACAGTTTTCTAGTGATTCTTGTATTTTATCAGAAGATGCTGGTAAAATTACTGATGTGGACATGATTCAGGATGGCCAGAAGCTGTATTTAGTCGATCGAACACATTAG 2598 0.4184 MTTAEGKNNNTKKKKKKVVVVEEKAEEIGNNKQQQTTSCSRSPSCNSSSSSSSSSDEREYEVQDVRDRLNSSRGSRFNLIEKELGLNSTRRKFSSQAILHGIRGCFSKDFVIHPDNRWYRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIIGQVAFLVDIVLQFFIAYRDSQTYRMVYRRTPIALRYLKSSFIFDLLGCMPWDIIYKVCGRKEEVRYLLWIRLYRVRKVTEFFHRLEKDIRVNYIITRIVKLIVVELYCTHTAACIFYYLATTLPESQEGYTWIGSLKLGDFSYAHFREIEIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSLDMILGAYLIGNMTALIVKGSKTEKFRDKMTDLMKYMNRNRLGRDIREQIKGHLRLQFESSYTEAAVIQDIPISIRSKISQTLYLPYIEQVSLFKGCSSEFINQIVIRLHEEFFLPGEVVMEQGNVVDQLYFVCHGVLEEVGTAEDGSEETITLVQPNSSFGEISILCNIPQPYTVRVCELSRLLRLDKQSFTNILDIYFYDGRKILNNLLEGRESFRGKQLESDITFHIGKQEAELALKVNSAAFNGDLYQLKGLIRAGADPNKTDYDGRSPLHLAASRGYEDITLFLIQEGVDVNIRDNFGNTPLLEAVRNGHDRIASLLVREGASMKIDNAGSFLCTAVARGDSDYLQRLLSNGMDPNLKDYDYRSPLHVAAAEGLYFMAKLLLEAGASVFTKDRWGNTPLDEARMSGNKNLIKLLEVAKSVQVSEFRCPSLEISDKLRPKKCTVFPFHPWDPKERRSHGIVIWVPTSIEELIKAASEELQFSSDSCILSEDAGKITDVDMIQDGQKLYLVDRTH* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0851 865 MobiDBLite consensus disorder prediction 1 62 - -
Dod08g0851 865 SMART cnmp_10 440 558 IPR000595 -
Dod08g0851 865 SUPERFAMILY Ankyrin repeat 589 766 IPR036770 -
Dod08g0851 865 MobiDBLite consensus disorder prediction 30 56 - -
Dod08g0851 865 ProSiteProfiles Ankyrin repeat profile. 680 712 IPR002110 GO:0005515
Dod08g0851 865 MobiDBLite consensus disorder prediction 15 29 - -
Dod08g0851 865 Gene3D - 122 366 - -
Dod08g0851 865 ProSiteProfiles Ankyrin repeat region circular profile. 616 648 - -
Dod08g0851 865 PANTHER POTASSIUM CHANNEL AKT1 52 864 IPR045319 GO:0005249|GO:0006813
Dod08g0851 865 Pfam Cyclic nucleotide-binding domain 460 544 IPR000595 -
Dod08g0851 865 ProSiteProfiles cAMP/cGMP binding motif profile. 440 560 IPR000595 -
Dod08g0851 865 SUPERFAMILY Voltage-gated potassium channels 113 365 - -
Dod08g0851 865 PRINTS EAG/ELK/ERG potassium channel family signature 155 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod08g0851 865 PRINTS EAG/ELK/ERG potassium channel family signature 312 329 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod08g0851 865 PRINTS EAG/ELK/ERG potassium channel family signature 356 365 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod08g0851 865 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod08g0851 865 Gene3D Jelly Rolls 426 561 IPR014710 -
Dod08g0851 865 ProSiteProfiles Ankyrin repeat profile. 616 648 IPR002110 GO:0005515
Dod08g0851 865 PANTHER POTASSIUM CHANNEL SKOR-LIKE 52 864 - -
Dod08g0851 865 Pfam Ankyrin repeats (3 copies) 686 766 IPR002110 GO:0005515
Dod08g0851 865 Pfam Ankyrin repeats (3 copies) 591 678 IPR002110 GO:0005515
Dod08g0851 865 CDD CAP_ED 440 554 IPR000595 -
Dod08g0851 865 Gene3D - 573 682 IPR036770 -
Dod08g0851 865 Pfam Ion transport protein 120 365 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod08g0851 865 SUPERFAMILY cAMP-binding domain-like 368 558 IPR018490 -
Dod08g0851 865 ProSiteProfiles Ankyrin repeat profile. 713 745 IPR002110 GO:0005515
Dod08g0851 865 ProSiteProfiles Ankyrin repeat region circular profile. 649 680 - -
Dod08g0851 865 Gene3D Helix hairpin bin 367 425 - -
Dod08g0851 865 SMART ANK_2a 680 709 IPR002110 GO:0005515
Dod08g0851 865 SMART ANK_2a 649 678 IPR002110 GO:0005515
Dod08g0851 865 SMART ANK_2a 713 742 IPR002110 GO:0005515
Dod08g0851 865 SMART ANK_2a 746 776 IPR002110 GO:0005515
Dod08g0851 865 SMART ANK_2a 616 645 IPR002110 GO:0005515
Dod08g0851 865 Pfam KHA, dimerisation domain of potassium ion channel 791 860 IPR021789 -
Dod08g0851 865 ProSiteProfiles Ankyrin repeat profile. 649 681 IPR002110 GO:0005515
Dod08g0851 865 ProSiteProfiles KHA domain profile. 792 865 IPR021789 -
Dod08g0851 865 PRINTS Ankyrin repeat signature 729 743 IPR002110 GO:0005515
Dod08g0851 865 PRINTS Ankyrin repeat signature 617 632 IPR002110 GO:0005515
Dod08g0851 865 ProSiteProfiles Ankyrin repeat region circular profile. 713 745 - -
Dod08g0851 865 Gene3D - 683 776 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0851 Dod-Chr8 10296491 10308199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0851 687 766 Ion Channels AT5G37500 34.314 1.65e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0851 K21867 - gmx:100814385 1511.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0851 08 10296491 10308199 Dod08g0851 08 10296491 10308199 ECH