Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0820 ATGATGAGTGATGATGATATTTTCGGGGCTTCTTCTTCCTTTTCCTATGGCCCAATGTCAGTGTCGGGTGGTAACTGCATGGACGAGTTGCTAGCCGCTGTAGGCTACAAGGTGCGATGCGGGGACATGTCTGACGTGGCGCAGAAGCTGGATCATCACGAAACGGCGATCGGAAATAACGTCGTCAATGCCAACGTTCCTGAAGACTACGGAACCTCCCCCAACATCATCGCTTCCGACGACGCCGTCGTTCACTACGACCCCATGCTCACCCAAAACGACACCAACGTATCCTTCGACCCGCTGCCGTTTTCGCAAATGCCGGCGGTGGACGACACCACCTTCTTCCAGTCCAACATTTTCGACGACAATTCAGCCTGCGCGTTTCCCGACATGCAAGAAGCATTGGGAAACTCAACTCTGGAAGCAGAACCATACTCTGACCTCACGCGCCCTTACGTGGCGGTGGAAGACACCGGCGTGAGTCTCGTCTATGCGCTCATGTCGTGCGCGGAGGCTATCCAACAAGGTAGCCTCGACCTCGCGGAGGCGCTCGTGAGCCACGCGGCGGCCCTCGTGGCGAATCAGGGCGGCGCGATGAGAAAAGTCGCTTCATACTTCGCCCACGCGCTGGCGCGTCGAATCTGTGGATTCTTCCCGAATGAATCCCTAACGCTAAGCTCCTCACTCTCCGATATGCTTCACGTTCACTTCTACGAGACCTGTCCCTACCTCAAATTCGCCCACTTCACAGCAAACCAAGCGATCCTCGAAGCGTTCTCCGCCGCAACCACCGTCCACGTCATCGACTTCGGCCTCAAACAGGGGCTACAATGGCCGGCACTAATGCAGGCCCTGGCACTCCGTCCCGGCGGACCGCCGTCCTTCCGCCTCACGGGAATCGGACCTTCCTCGCCTGAAAACGCCGTCGACACGCTTCAGCAAGTCGGTTTTCGGCTCGCGGAACTCGCGCGAACGATTAGGGTTCGGTTCGAGTTCCGCGGATTCGTATGCAACACCCTCTCGGATCTCGATCCAACGGTTCTTGATATCCGACCGGGGGAATCCGTTGCGGTTAACGCGGTTTTCGAGCTGCACCGTCTGTTGGCGAAACCGGGTTCGTTAGACACGGTTATGAATACGGTTAGGGGAATCAGACCGGAGATCGTAACGGTCGTGGAGCAGGAAGCGAACCATAACGGTTCGGTTTTTGTGGAGCGGTTCACGGAGGCAATGCATTACTATTCGAGCTTGTTTGACTCGATGGAAGGGTCGGTGGTTGCGTGCGAGGACTCGGTGATGTCGGAGTTGTATTTGGGGAGGCAGATATGCAACGTGGTGGCGTGTGAAGGGGAGGAGAGGGTGGAGCGGCACGAGACGCTGGCTCAGTGGCGGGTTCGGATGGGTTTGGGTGGGTTCGAACCGGTTCGGCTCGGTTTAAATGCTTTTAGACAGGCGAGGATGTTGTTGGCGCTGTTTGCTGGAGGGGAAGGATATAGGGTGGAGGAGAATGACGGGTGTCTCTTGCTTGGGTGGCAGACCAGGCCGCTCATTGCCACCTCCGCCTGGAGAGTCGCCGGCGCCACCGAGTGA 1593 0.575 MMSDDDIFGASSSFSYGPMSVSGGNCMDELLAAVGYKVRCGDMSDVAQKLDHHETAIGNNVVNANVPEDYGTSPNIIASDDAVVHYDPMLTQNDTNVSFDPLPFSQMPAVDDTTFFQSNIFDDNSACAFPDMQEALGNSTLEAEPYSDLTRPYVAVEDTGVSLVYALMSCAEAIQQGSLDLAEALVSHAAALVANQGGAMRKVASYFAHALARRICGFFPNESLTLSSSLSDMLHVHFYETCPYLKFAHFTANQAILEAFSAATTVHVIDFGLKQGLQWPALMQALALRPGGPPSFRLTGIGPSSPENAVDTLQQVGFRLAELARTIRVRFEFRGFVCNTLSDLDPTVLDIRPGESVAVNAVFELHRLLAKPGSLDTVMNTVRGIRPEIVTVVEQEANHNGSVFVERFTEAMHYYSSLFDSMEGSVVACEDSVMSELYLGRQICNVVACEGEERVERHETLAQWRVRMGLGGFEPVRLGLNAFRQARMLLALFAGGEGYRVEENDGCLLLGWQTRPLIATSAWRVAGATE* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0820 530 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 524 IPR005202 -
Dod08g0820 530 SMART DELLA_2 28 96 - -
Dod08g0820 530 Gene3D - 26 93 IPR038088 -
Dod08g0820 530 Pfam Transcriptional regulator DELLA protein N terminal 28 88 IPR021914 -
Dod08g0820 530 ProSiteProfiles GRAS family profile. 154 524 IPR005202 -
Dod08g0820 530 Pfam GRAS domain family 164 524 IPR005202 -
Dod08g0820 530 PANTHER DELLA PROTEIN RGL1 28 524 IPR030006 GO:0003712|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0820 Dod-Chr8 9776443 9778487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0820 27 525 GRAS Transcription Factor Family AT1G66350 55.664 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod08g0820 GRAS 2.1e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0820 K14494 - gmx:547719 572.392