Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0814 ATGATGGTTTTCTCCCAAGGAACCTGCACTGATGATAACTCAAGGGACCAATGTTCTGGTGTCCTAGAAACTCCTCCGTACGCTTCCCCTTCAGTCTCTGATGTATATTCTGAATACAAGAGGCTCAAATTCAGAACCTTCTTGAGAAAACTGATGTGGGATTTTGCCCTTGCATGTGTTGCTTCACCCTGCAGTGGCAAAAGCAAAGGCGAAGGACTCAAAAAGACGTCTTTGGATCAGAACAAGGCCTTGCTGCTTGGGGAGCATGGTTGGGGTGGATCAGAATTGGTGAATGCTGAGCCTCATTCATCTTTCAGGTTCAGCTTCTGTTCTCAGGTTGAGCTAGAATCCTTCAACATGGTGAGTTCTTCTTCTTCTGCTGCTGCTGCTGCAGCAGCAGCAGTTTTGATGGTGAGTTTGGAGTGTGAGTCTAGAGTCAGGGAGATGAAATGGAAGAGGATGGAGTCACTGGAGAAGAGCATTTCTCCAGTTTCCAACACTTTGATCAGGTTCAACTACCATGAAATTGTGTACGCTACGCGGAATTTCTCCGAAGGTAGAGTGTTGGGAAGAGGGGCCTTGAGCTGTGTCTTTAGGGGAAGAGTTGGGCTTTGGAGGACTGCTGTTGCAATCAAAAGGCTGGACAAGGAAGACAAGGAGTGTGCCAAGGCCTTTTGCAGAGAATTGATGATTGCTAGCTCTCTTCATAACCCAAACATTGTTCCCTTAGTGGGATTTTGCATTGACTCAGAAGAAGGTTTGTTTTTGGTGTACAAGTATGTCTCAGGGGGCAGCTTAGAGCATCACTTGCATGGGAGGAAGAAGAATGTGAAAGGTGGTTCATCACTTCCATGGTCTGTGAGGTATAAAGTTGCAATAGGGATTGCAGAAGCCTTAGATTATCTGCATAATGGAGCTGAAAAATGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTCCTTTCCTCCAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCTACATGGACTTCTGCACCTTCAGTTCCTTTTCTTTGCAAAACTGTCAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTTCAACATGGGAAGGTATCGGATAAGACTGATGTTTATGCTCTTGGAGTGGTTTTATTGGAACTCATAACTGGCCGGAAGCCAATTGAAGCAAAAAGACCTGCAGGAGAGGAGAACTTGGTGTCATGGGCTAAACCTTTGCTACAGAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAACTCACTTGCAGCTCAAGATTCTCGAGTCAAATTGCGCGGATGATTGAAGCGGCGGTCGCATGTGTTACAAATGAAGAGTGTAGGAGGCCTGGCATACATGAGATTCTTGCAATACTAAAAGGTGAACAAGAGCCTGTTTTCTCTAGAAGAAGGAAATCCAGTTATCTTGGGAATGGATGTGTGGTTGATTGTTACACTCAATTGCAGCATACAAATAGTGAGATGAAAAGTCACTTGGCTTTGGCAATGCTAGGAGTGTCAGAGTTTGAGGATGATGATTATCTTTATTGTCGGTAA 1569 0.4423 MMVFSQGTCTDDNSRDQCSGVLETPPYASPSVSDVYSEYKRLKFRTFLRKLMWDFALACVASPCSGKSKGEGLKKTSLDQNKALLLGEHGWGGSELVNAEPHSSFRFSFCSQVELESFNMVSSSSSAAAAAAAAVLMVSLECESRVREMKWKRMESLEKSISPVSNTLIRFNYHEIVYATRNFSEGRVLGRGALSCVFRGRVGLWRTAVAIKRLDKEDKECAKAFCRELMIASSLHNPNIVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKNVKGGSSLPWSVRYKVAIGIAEALDYLHNGAEKCVVHRDIKPSNILLSSKKIPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELITGRKPIEAKRPAGEENLVSWAKPLLQKGKGAIEELLDPQLTCSSRFSSQIARMIEAAVACVTNEECRRPGIHEILAILKGEQEPVFSRRRKSSYLGNGCVVDCYTQLQHTNSEMKSHLALAMLGVSEFEDDDYLYCR* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0814 522 SMART serkin_6 183 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0814 522 PANTHER OS01G0750732 PROTEIN 3 522 - -
Dod08g0814 522 Gene3D Transferase(Phosphotransferase) domain 1 261 478 - -
Dod08g0814 522 SUPERFAMILY Protein kinase-like (PK-like) 163 463 IPR011009 -
Dod08g0814 522 ProSiteProfiles Protein kinase domain profile. 183 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0814 522 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 3 522 - -
Dod08g0814 522 Pfam Protein kinase domain 184 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod08g0814 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Dod08g0814 522 Gene3D Phosphorylase Kinase; domain 1 143 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0814 Dod-Chr8 9715449 9719087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0814 171 500 Trihelix Transcription Factor Family AT1G70460 39.701 5.70e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod08g0814 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0814 - - gmx:100808074 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0814 08 9715449 9719087 Dod08g0814 08 9715449 9719087 ECH
Dod04g0235 04 2903375 2905871 Dod08g0814 08 9715449 9719087 PCT