Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0812 ATGTCAGGTATGGAAGAAGGAGTAACCTATGGCATGCGTCCTTGTTGTCCATCAAATTATGCGGTAACCTTGGCACAGAAGGTGATTGCAGAAGCTATTGGGACATACTTTGTGGTATTTGCGGGGTGTGGTGCTGTGGCAGTGAATAAGATCTATGGTTCTGTCTCGTTTCCGGGCGTTTGCATCACATGGGGTTTGATTGTAATGGTGATGATTTACTCTGTTGGTCATGTCTCTGGAGCTCACTTCAACCCTGCAGTTACCATCACTTGGGGCATCTTTCGCCGCCTCCCTTTTAAAGAGGTGCCACTATACATTGTGGCTCAGCTAGTGGGGTCTTTACTCGCCAGTGGCACATTGGCCCTAATGTTTGATGTCACACCTAAAGCTTATTTTGGGACGGTACCCGTTGGATCTGCTGGCCAGGCCTTAGTTGCTGAAATCATCATCACCTTTCTCTTGATGTTTGTCATCTCTGCCGTTTCCACTGATGACAGAGCGGTAGGTCAATTGACAGGAGTTGCTGTTGGAATGACTATAATGTTGAATGTCTTTGTTGCTGGGCCTGTATCAGGAGCTTCCATGAACCCCGCAAGAAGTATTGGTCCTGCTCTTGTCAAACATGTTTACAAAGGGTTATGGGCATATGTTGTTGGTCCCATTGCTGGAGCCATAGCAGGAGCATTTGTCTATAACTTCCTTAGAGCCGCAGACAAGCCACTTTCAGAGGAATTCTAA 738 0.4688 MSGMEEGVTYGMRPCCPSNYAVTLAQKVIAEAIGTYFVVFAGCGAVAVNKIYGSVSFPGVCITWGLIVMVMIYSVGHVSGAHFNPAVTITWGIFRRLPFKEVPLYIVAQLVGSLLASGTLALMFDVTPKAYFGTVPVGSAGQALVAEIIITFLLMFVISAVSTDDRAVGQLTGVAVGMTIMLNVFVAGPVSGASMNPARSIGPALVKHVYKGLWAYVVGPIAGAIAGAFVYNFLRAADKPLSEEF* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0812 245 SUPERFAMILY Aquaporin-like 22 239 IPR023271 -
Dod08g0812 245 CDD MIP 26 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PANTHER AQUAPORIN NIP4-1-RELATED 15 243 - -
Dod08g0812 245 Gene3D Glycerol uptake facilitator protein. 17 243 IPR023271 -
Dod08g0812 245 TIGRFAM MIP: MIP family channel proteins 30 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 ProSitePatterns MIP family signature. 82 90 IPR022357 -
Dod08g0812 245 Pfam Major intrinsic protein 22 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod08g0812 245 PANTHER AQUAPORIN NIP2-1 15 243 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0812 Dod-Chr8 9657932 9660472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0812 3 243 Major Intrinsic Protein MIP AT5G37820 67.769 1.37e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0812 K09874 - gmx:100791338 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0812 08 9657932 9660472 Dod08g0812 08 9657932 9660472 ECH