Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0808 ATGAGAAAACCTTGTTGTGACAAAGAAAGCATCAACAAAGGTGCTTGGTCCAAGCAAGAAGACCAAAAGCTCATTGATTACATCCAAGCTCAGGGTGAAGGCTGTTGGCGTGCCATTCCCAAGGCTGCTGGGTTGCATCGTTGTGGCAAAAGCTGTAGGCTAAGATGGTTAAACTACTTAAGACCAGACATCAAACGTGGAGTCTTTGCCCAAGATGAAGAAGACCTCATCATCAAACTCCATGCCCTCCTTGGTAACCGGTGGTCACTCATAGCTGGAAGGTTGCCAGGGCGTACAGACAATGAGGTGAAGAACTATTGGAACTCTCACATCCGAAGAAAGCTAATAAAGATAGGAATTGATCCAAATAACCATAAGCTACACCAAAGCTTTCCTTCTCCTCATTCCCACCTCCTTGCTTCATCTGCTGGTAATTCATCATCTGTCTCCTTGAGCAAAGAGCGTAGTGCCCCTTTCATCAAATCCACTGGTGCCATGGATCAAGGGATTTCGATCACAAATAGTTGCCTTGAAGAAGAAACAGCAATGGTTTCGCCATTGAATCTTGACCTCACCATTGCTTTGCCTCCGCCTAGACATGCTCTTGTGGAGCCTGCACCAAATTCTGTGTCCTTTAAGACAAGAAACGTGGACATAGATCTTAATTGTTAA 672 0.4509 MRKPCCDKESINKGAWSKQEDQKLIDYIQAQGEGCWRAIPKAAGLHRCGKSCRLRWLNYLRPDIKRGVFAQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKIGIDPNNHKLHQSFPSPHSHLLASSAGNSSSVSLSKERSAPFIKSTGAMDQGISITNSCLEEETAMVSPLNLDLTIALPPPRHALVEPAPNSVSFKTRNVDIDLNC* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0808 223 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Dod08g0808 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Dod08g0808 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Dod08g0808 223 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 203 - -
Dod08g0808 223 CDD SANT 71 111 IPR001005 -
Dod08g0808 223 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Dod08g0808 223 CDD SANT 15 60 IPR001005 -
Dod08g0808 223 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Dod08g0808 223 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Dod08g0808 223 Gene3D - 68 134 - -
Dod08g0808 223 SMART sant 12 62 IPR001005 -
Dod08g0808 223 SMART sant 65 113 IPR001005 -
Dod08g0808 223 PANTHER MYB TRANSCRIPTION FACTOR 2 203 - -
Dod08g0808 223 Gene3D - 13 65 - -
Dod08g0808 223 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0808 Dod-Chr8 9616346 9618377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0808 2 195 MYB Transcription Factor Family AT4G09460 51.220 4.09e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod08g0808 Myb_DNA-binding 8.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0808 K09422 - gmx:100306391 309.301