Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0796 ATGGCTTTCAACATCATCAGCATTGTAACCCTCGTAGCTCTCCTCACAGCAACCGAAGCCAAAATCCCCGGTGTCTACACCGGCGGCTCGTGGCAGAGCGCTCACGCTACATTCTACGGCGGCAGCGACGCCTCAGGAACAATGGGAGGGGCATGCGGTTATGGAAACTTGTACAGCCAAGGCTACGGCGTGAACACAGCGGCGTTGAGCACTGCTTTGTTCAACAACGGGTTCAGCTGCGGGGCTTGCTTCGAGATAAAGTGCGCGGATGACCCGAACTGGTGCCATGCAGGCTCGCCTTCGATACTCGTGACTGCCACGAACTTTTGCCCTCCGAACTACGCTCTGCCTAGCGACAATGGTGGGTGGTGCAACCCTCCAAGGCCACACTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCTGAGTACCGCGCTGGAATCGTGCCTGTCTCGTACCGCAGGGTGCCATGCCGCAAGGCCGGTGGGATGAGGTTCACGATCAACGGCTTCCGTTACTTCAACTTGGTTCTGATCACCAACGTTGCGGGTGCAGGGGATATCATGAGGGTGAGCGTGAAAGGGTCAAGGACAGAGTGGATGAGCATGAGCCGCAACTGGGGTCAGAACTGGCAGTCAAACGCTGTTCTCGTTGGTCAGTCACTCTCCTTCAGGGTCACAGCCAGTGACCGTCGCACTTCCACCTCTTGGAACATTGCCCCTTCTAATTGGCAATTTGGCCAAACCTTCACCGGCAAAAATTTCAGGGTCTAA 774 0.5633 MAFNIISIVTLVALLTATEAKIPGVYTGGSWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCADDPNWCHAGSPSILVTATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKAGGMRFTINGFRYFNLVLITNVAGAGDIMRVSVKGSRTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTASDRRTSTSWNIAPSNWQFGQTFTGKNFRV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0796 257 Gene3D - 17 159 IPR036908 -
Dod08g0796 257 PANTHER EXPANSIN-A15 5 256 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Dod08g0796 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Dod08g0796 257 Pfam Lytic transglycolase 66 153 IPR009009 -
Dod08g0796 257 SUPERFAMILY PHL pollen allergen 161 252 IPR036749 -
Dod08g0796 257 SUPERFAMILY Barwin-like endoglucanases 13 181 IPR036908 -
Dod08g0796 257 SMART dpbb_1 66 153 IPR007112 -
Dod08g0796 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Dod08g0796 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 163 IPR007112 -
Dod08g0796 257 PANTHER EXPANSIN-A4 5 256 - -
Dod08g0796 257 Gene3D - 164 255 IPR036749 -
Dod08g0796 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Dod08g0796 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Dod08g0796 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Dod08g0796 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Dod08g0796 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Dod08g0796 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Dod08g0796 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0796 Dod-Chr8 9511813 9515631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0796 1 257 Expansin Gene Family AT2G39700 82.879 1.27e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0796 - - gmx:100812894 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g1364 07 37114878 37118522 Dod08g0796 08 9511813 9515631 ECH
Dod10g1728 10 38417079 38420074 Dod08g0796 08 9511813 9515631 ECH
Dod03g2936 03 61600627 61603810 Dod08g0796 08 9511813 9515631 ECH
Dod08g0796 08 9511813 9515631 Dod08g0796 08 9511813 9515631 ECH