Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0794 ATGGTGTTGAAGAGAAAGCTGGACTATGGATTCAGGGGCTTTCAGGTCCCCTATATACCTAGATTTCCTAGATCTGCAACAAGGAGGTGTCCTTCCAAGAAATCAGCTGGGGATGGCCAAGCCTGTGTATTTGACATGCTGGCATCTTTGGCTGGCAAGTTGTTGCTGGAGGGTGAAAGTTCTGCTTCTAGCAATGCATCTGAAGGAAATCATCAGCCTGCCATTAGCCAAGGTGTTGTTGATCAGGAAGGACAGGATGAAGTTAAACCATTGGCAGGAGATGGGATTCATCATGGAGGTTGTGCGGAGAGTATTTCTTTGACTGAGGTGGGCTCGCAAAAGAGTAGTCAGAAGCATCTTCAGCTAGCTGAGACTAATTGTGTACCTGAATGCATTTCAGTTACTAATAATTCAGACTGTTGGGAGAAAGTTGAAGCTGATGTGAAGTCCGAGATTGTTAAATTGGACGATAAGTTTGGAAATAATTCTAGTAGGTTAGCAGAAGTACCCGAAGAGTCTTCTGATGGTAATATAAAGAATGGATTTAGACTGGAACATGAGGCTGGCAGTTCAGGTTCCAAGGGATCATCTTTGGATGATAAATTTAGTGTGAAGGATTCATTGGAATTGTGTGTTAACTCTCCCGCACTAATGGACTCCAACAGTAATGTTATTTGTAAGGAATTGTTTCCTAATGCTTCCTTTTCCAAGCATGGGAATGATATTAAGTTAGGTTTTAGAGATGATGACGAAAAACTTTTAAGGTGCAAAAAGGTTTGCACCAAGCCAAAGGCTTTCAGGCCTCCACAACTCACTGCACACCAAAAAATCAGGAAGAAGCTGGCTTACAAATACTGGAAGGTTGCTCCAAAGTTGACGGATTGTGAACATTCTAGATCTGAAGAGGGAGGAAAACCCTTGTTCCATAAGAGGAAGACTGGTTACAGTTTTGAAAGATTTCAGCATGACATTCTTTTCAAGAGGAGGAAATTCTTTGATCGGGGTTCGGTGGTAACATCTGATGGAGGATTCAGCAGTGAAAGTGTATCTAATTCACCTGAGAAAGAAATGGATGGTGACAGCCCTAGCTCATCTGCAAAACTCCCTGCATCTCAGGATTCTCATGTGAAGTTTAGCATCAAGTCATTCAGGATACCAGAGCTTTATATTGATGTTCCTGAAACTGCAACTGTTGGTTCATTAAAGAGGACAGTCATGGAGGCAGTAATGGCTATACTGGGAAGTGGTGTGCGTGTTGGTGTTCTTGTTAAAGGTAAAAAAGTTAGAGATGACAGCAGAACTCTTCGTCAGACTGGTATATGTTGTAAAGAAAAGGTGGATAAACTCGGTTTCACACTAGAGCCAAGTTCTATTCAAGCTTCTCCAACTGTTTGTGTTGGTGATCCTTCTCAATGTGAAACATCGCAACCTACCAGGTCCCCAGGCACTCCTATCTTAGATTCGGGGACAACTGTTGCCTTACAGGACTCATCCTTGCTGACAAATACAGGCGACCTTGTTGAAAGTAACCATGAGTCAACTCCTTCCTATTCTGACACCATAGCTGACAAAATAACACCAGATTCCGGAGCACTAATTGCTATTCCAGCTAGGAGCACAGAGGCATTAGCTGTGGTTCCTGTGAGTCAGAAAACCAGGCGCCCGGATCTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGTCTGAAGTAGAAGCACTTGTGCAGGCAGTGGAGGACCTTGGAACTGGAAGGTGGCGCGATGTAAAGTTGCGTGCCTTTGAGAATGCAGACCATAGAACTTATGTAGACCTTAAGGATAAATGGAAAACATTAGTGCACACTGCAAAAATCTCTCCTCAGCAAAGGAGAGGAGAGCCAGTGCCCCAGGATCTGCTGAACAGGGTTTTGACTGCTCATGCTTACTGGTCCCATCACCAAGCCAAGCAGCATGGTAAGCATCAAGCTGTTAACATGAAGACCCCAGAAGCCTCTGCTGAGAGACACAGTGTTTGTGGCATCCAATCACTTGTATGA 2037 0.4408 MVLKRKLDYGFRGFQVPYIPRFPRSATRRCPSKKSAGDGQACVFDMLASLAGKLLLEGESSASSNASEGNHQPAISQGVVDQEGQDEVKPLAGDGIHHGGCAESISLTEVGSQKSSQKHLQLAETNCVPECISVTNNSDCWEKVEADVKSEIVKLDDKFGNNSSRLAEVPEESSDGNIKNGFRLEHEAGSSGSKGSSLDDKFSVKDSLELCVNSPALMDSNSNVICKELFPNASFSKHGNDIKLGFRDDDEKLLRCKKVCTKPKAFRPPQLTAHQKIRKKLAYKYWKVAPKLTDCEHSRSEEGGKPLFHKRKTGYSFERFQHDILFKRRKFFDRGSVVTSDGGFSSESVSNSPEKEMDGDSPSSSAKLPASQDSHVKFSIKSFRIPELYIDVPETATVGSLKRTVMEAVMAILGSGVRVGVLVKGKKVRDDSRTLRQTGICCKEKVDKLGFTLEPSSIQASPTVCVGDPSQCETSQPTRSPGTPILDSGTTVALQDSSLLTNTGDLVESNHESTPSYSDTIADKITPDSGALIAIPARSTEALAVVPVSQKTRRPDLVQRRTRRPFSVSEVEALVQAVEDLGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQDLLNRVLTAHAYWSHHQAKQHGKHQAVNMKTPEASAERHSVCGIQSLV* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0794 678 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 658 IPR031105 -
Dod08g0794 678 MobiDBLite consensus disorder prediction 340 370 - -
Dod08g0794 678 CDD SANT_TRF 564 614 - -
Dod08g0794 678 Gene3D - 552 655 - -
Dod08g0794 678 MobiDBLite consensus disorder prediction 61 83 - -
Dod08g0794 678 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 658 - -
Dod08g0794 678 SUPERFAMILY Ubiquitin-like 371 446 IPR029071 -
Dod08g0794 678 MobiDBLite consensus disorder prediction 61 79 - -
Dod08g0794 678 MobiDBLite consensus disorder prediction 165 200 - -
Dod08g0794 678 SUPERFAMILY Homeodomain-like 564 644 IPR009057 -
Dod08g0794 678 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 559 617 IPR017930 -
Dod08g0794 678 ProSiteProfiles Myb-like domain profile. 558 613 IPR001005 -
Dod08g0794 678 SMART sant 562 615 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0794 Dod-Chr8 9467707 9472948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0794 - - gmx:100795471 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2942 03 61664712 61670264 Dod08g0794 08 9467707 9472948 ECH
Dod08g0794 08 9467707 9472948 Dod08g0794 08 9467707 9472948 ECH