Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0791 ATGGCTGAGGCAAAGAGGTTATCTAAAATAAATGCATTAGAAAATGAATTGCATGGTTTGGAATTTCTTTTGCATCAGCTTGAAGAAGTGGAGGAGAGTGATGTTCCGTCTTTCCTGGTACGAACTGGCTACGCCTCTAGGCAGGAGATTGAATCTGCCCGGAGTAAAGTTACGCAATCTTTACGTAAAGCAAAAGGTGAACCAAAGAATGAACAAACTGAAACTGAAACAGCTGACCATTCCAATAATGAGAAGTATTCTCTCATAAGCATCCCTGATGAGATGTTGACCCCAGAGCAGCTCAATGAAAAGAAGAAACAGTTGTCAGTCAAATTCATGTCTGAAGGGCGGCAGCGACTGAAACAGAAACGCCATGAAGAGGAATTGGAACGAGAGAGGAAGCAACAGCTAGAGGAGGAGAAACGCTTGGAGAACCCGGAGCTTTACCTGGAACAATTGCATGCTAGATACAAAGACCTTTTGGATAAAGTTGAACAAAATAAACGGCTCAAGACAAATGGAGGCCATAATGGGAATAATTTGTCTGGTGGTGTTGGCCGTGGTGAGAGACTGAATGCTGCTCAGAGGGAACGGTTGCGCCTCTTGACAACTGCAGCCTTTGATCGTGGTAAGGGTGAGGATACATTTGGTGCCAGAGATGAAGATTGGCAACTGTACAAATTGATGAGCAAAGATAATAACGATGACGATGAGGAGGGACCTGATGAGGATGAGGTAGAGCTCGCCCGTATTTCTTCTAGGCTCCAGGACTTGGATACAACATTTGTGCCCAGGTTTAGATGCCCTGAAATCTTGTTTAATCCAAACTGGATTGGGATTGATCAGGTAGGATTGGACGAGATGGCTGGTGTCTCCATAAGGAGGCTAGGATACAGAGATGAAGCCTTGGAAAACAAACTGACCAGTTCCATACTTGTGACTGGTGGAAGTGCTCTTTTCCCTGGTATAATTGAACGCCTGGAAGCTGGAATTCGGATGATTAGACCATGCGGATCAACAATAAAAATAGTTAGAGCATTGAATCCAGTTATGGATGCATGGCGTGGGGCTGCTTCCTATGCTTCAGCCTCACAGTTCCATGCTCAAACTTTCAGTAGAATGGATTATTATGAGAGAGGTGAAGACTGGCTTCGCAATTATCAACTGCAATATACGTTATAG 1182 0.4425 MAEAKRLSKINALENELHGLEFLLHQLEEVEESDVPSFLVRTGYASRQEIESARSKVTQSLRKAKGEPKNEQTETETADHSNNEKYSLISIPDEMLTPEQLNEKKKQLSVKFMSEGRQRLKQKRHEEELERERKQQLEEEKRLENPELYLEQLHARYKDLLDKVEQNKRLKTNGGHNGNNLSGGVGRGERLNAAQRERLRLLTTAAFDRGKGEDTFGARDEDWQLYKLMSKDNNDDDEEGPDEDEVELARISSRLQDLDTTFVPRFRCPEILFNPNWIGIDQVGLDEMAGVSIRRLGYRDEALENKLTSSILVTGGSALFPGIIERLEAGIRMIRPCGSTIKIVRALNPVMDAWRGAASYASASQFHAQTFSRMDYYERGEDWLRNYQLQYTL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0791 393 MobiDBLite consensus disorder prediction 49 83 - -
Dod08g0791 393 MobiDBLite consensus disorder prediction 115 140 - -
Dod08g0791 393 SUPERFAMILY Actin-like ATPase domain 259 385 IPR043129 -
Dod08g0791 393 Coils Coil 150 170 - -
Dod08g0791 393 Coils Coil 117 146 - -
Dod08g0791 393 Gene3D - 353 381 - -
Dod08g0791 393 Gene3D - 283 352 - -
Dod08g0791 393 SMART actin_3 19 390 IPR004000 -
Dod08g0791 393 Pfam Actin 265 385 IPR004000 -
Dod08g0791 393 PANTHER ACTIN 47 385 IPR004000 -
Dod08g0791 393 Coils Coil 10 30 - -
Dod08g0791 393 Gene3D Actin; Chain A, domain 4 264 282 - -
Dod08g0791 393 MobiDBLite consensus disorder prediction 56 81 - -
Dod08g0791 393 PANTHER ACTIN-RELATED PROTEIN 5 47 385 IPR027664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0791 Dod-Chr8 9455442 9457321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g0791 243 380 Cytoskeleton Gene Families AT5G09810 32.877 4.98e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0791 K11672 - gmx:100804305 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g0261 04 3175290 3181380 Dod08g0791 08 9455442 9457321 PCT