Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g0779 ATGGCTTCATCAATCTCCAGCATCAGCAACAAGAAGGAAAATTCTTCTTCATCTTGGACACCATTGCAGAACAAACAATTCGAAAGGGCACTTGCTTTGTACGACAAAGACACCCCAGATCGGTGGCAAAATATCGCCAAAGTAGTCGGTGATAAATCAGCTGAAGAAGTGAAGAGACACTATGAGATCCTTTTGGAGGATCTTAGGCATATAGAGTCTGGACGTGTTCCTGTTCCAAACTATAAGTCCACAACAAGCAGCTAG 264 0.4318 MASSISSISNKKENSSSSWTPLQNKQFERALALYDKDTPDRWQNIAKVVGDKSAEEVKRHYEILLEDLRHIESGRVPVPNYKSTTSS* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g0779 87 ProSiteProfiles SANT domain profile. 14 69 IPR017884 -
Dod08g0779 87 PANTHER PROTEIN RADIALIS-LIKE 3 7 85 - -
Dod08g0779 87 CDD SANT 19 65 IPR001005 -
Dod08g0779 87 MobiDBLite consensus disorder prediction 1 21 - -
Dod08g0779 87 Pfam Myb-like DNA-binding domain 17 61 IPR001005 -
Dod08g0779 87 Gene3D - 10 78 - -
Dod08g0779 87 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Dod08g0779 87 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 7 85 IPR044636 GO:0003700
Dod08g0779 87 ProSiteProfiles Myb-like domain profile. 11 65 IPR001005 -
Dod08g0779 87 SMART sant 15 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g0779 Dod-Chr8 9288795 9289276 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod08g0779 Myb_DNA-binding 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g0779 - - gmx:100788168 136.346